RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 WDR54Q9H977 334 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 BCO1Q9HAY6 547 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 FAM221AA4D161 298 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 BTBD17A6NE02 478 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 G3V3Y1 287 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 GATCO43716 136 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SSSCA1O60232 199 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 PAX6P26367 422 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 NUBP1P53384 320 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 TAS2R30P59541 319 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SSTP61278 116 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 TMPPEQ6ZT21 453 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 FAM219AQ8IW50 185 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF775Q96BV0 537 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 C8orf44Q96CB5 159 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 TRBV5-5A0A0J9YX44 114 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 A0A1W2PPE2 198 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 PQLC2LA1A4F0 135 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 PATE3B3GLJ2 98 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 THY1P04216 161 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 FGF5P12034 268 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 AADACP22760 399 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 EIF1P41567 113 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF121P58317 390 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 C2orf68Q2NKX9 166 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 THEM4Q5T1C6 240 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SLC36A1Q7Z2H8 476 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 TMEM104Q8NE00 496 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 ST8SIA1Q92185 356 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 LRRK1Q38SD2 2015 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SEC14L6B5MCN3 397 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 MPZL1O95297 269 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 SLC37A1P57057 533 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 GGNBP1Q5YKI7 109 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 MRPL21Q7Z2W9 205 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 OR2I1PQ8NGU4 316 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 RGP1Q92546 391 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 GPR173Q9NS66 373 aa10.22□□□□□ -0.77
CLSTN3-201ENST00000266546 LOC102725191A0A1B0GVB3 256 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 HSPB6O14558 160 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 HLA-HP01893 362 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 HTR5AP47898 357 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 RRADP55042 308 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 DHODHQ02127 395 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 ARSJQ5FYB0 599 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 ZNF100Q8IYN0 542 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 FSCN3Q9NQT6 498 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 PARP11Q9NR21 331 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 KLK13Q9UKR3 277 aa10.21□□□□□ -0.77
CLSTN3-201ENST00000266546 A0A1W2PPV4 95 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 A0A1W2PQD3 144 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 QDPRP09417 244 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 FGF7P21781 194 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ASCL1P50553 236 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 EFNB1P98172 346 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ZNF117Q03924 483 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 AADACL3Q5VUY0 350 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 RPS19BP1Q86WX3 136 aaKnown RBP10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 PTPMT1Q8WUK0 201 aaPredicted RBP10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 SDSLQ96GA7 329 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 SUCNR1Q9BXA5 334 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 TWSG1Q9GZX9 223 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 OR51M1Q9H341 326 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 LANCL2Q9NS86 450 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ALG1L2C9J202 215 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 RAC2P15153 192 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ZBTB25P24278 435 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ZNF684Q5T5D7 378 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 CST9LP1Q5W188 147 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 ATG4DQ86TL0 474 aaPredicted RBP10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 NECAP1Q8NC96 275 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 KCNIP1Q9NZI2 227 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 FAM208BQ5VWN6 2430 aa10.21□□□□□ -0.78
CLSTN3-201ENST00000266546 OR6C6A6NF89 314 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 UPK3AO75631 287 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 CST7O76096 145 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 TNFSF15O95150 251 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 KIR3DL2P43630 455 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 PSMB3P49720 205 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 DHRS7BQ6IAN0 325 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 THNSL2Q86YJ6 484 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 SLC39A7Q92504 469 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 FER1L6-AS2Q96M78 137 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 ENY2Q9NPA8 101 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 SEMA5BQ9P283 1151 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 TRAPPC2LH3BP13 241 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 MT-CO3P00414 261 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 CD226Q15762 336 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 MICBQ29980 383 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 C1QL3Q5VWW1 255 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 LANCL3Q6ZV70 420 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 OR51F2Q8NH61 342 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 SLC25A43Q8WUT9 341 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 PSMF1Q92530 271 aa10.2□□□□□ -0.78
CLSTN3-201ENST00000266546 FAM122AQ96E09 287 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms