RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MDFIC2A0A1B0GVS7 189 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 ADH4P08319 380 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 SLC23A3Q6PIS1 610 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 NAA40Q86UY6 237 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 CLDN23Q96B33 292 aa13.62□□□□□ -0.23
TIMP3-201ENST00000266085 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 IL34Q6ZMJ4 242 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 RNF133Q8WVZ7 376 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 FGF11Q92914 225 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF385AQ96PM9 386 aaKnown RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 RNF32Q9H0A6 362 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 NKX2-8O15522 239 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 SSX4O60224 188 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 NME2P1O60361 137 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 ERHP84090 104 aaKnown RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 DHRS2Q13268 280 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 ZFP82Q8N141 532 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 SLC26A10Q8NG04 563 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF75AQ96N20 296 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 NEURL2Q9BR09 285 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 MRPS18BQ9Y676 258 aaKnown RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 NDUFB3O43676 98 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 CST2P09228 141 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 ZBTB25P24278 435 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 CD80P33681 288 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 RELL2Q8NC24 303 aaPredicted RBP13.61□□□□□ -0.23
TIMP3-201ENST00000266085 OR10AC1Q8NH08 325 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 OR6S1Q8NH40 331 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 BTF3L4Q96K17 158 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 WFDC6Q9BQY6 131 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 MARVELD1Q9BSK0 173 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 SLC25A32Q9H2D1 315 aa13.61□□□□□ -0.23
TIMP3-201ENST00000266085 EFEMP2O95967 443 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 LRRC10Q5BKY1 277 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 RFESDQ8TAC1 157 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 ERRFI1Q9UJM3 462 aaPredicted RBP13.6□□□□□ -0.23
TIMP3-201ENST00000266085 KPTNQ9Y664 436 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 ALX3O95076 343 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 OR13C7P0DN81 318 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 ADIRFQ15847 76 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 LCN15Q6UWW0 184 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 LHX4Q969G2 390 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 PSENENQ9NZ42 101 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 H3BP45 60 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 KRASP01116 189 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 MT-ND4LP03901 98 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
TIMP3-201ENST00000266085 HGDQ93099 445 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 COL6A6A6NMZ7 2263 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 BDP1A6H8Y1 2624 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 NUDT19A8MXV4 375 aa13.6□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
TIMP3-201ENST00000266085 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 LNP1A1A4G5 178 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 CLEC18AA5D8T8 446 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 YIF1AO95070 293 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 IFI6P09912 130 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 SPINK2P20155 84 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 CLEC18CQ8NCF0 446 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 OR5AP2Q8NGF4 316 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 AP1S3Q96PC3 154 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 DDA1Q9BW61 102 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 SAMD10Q9BYL1 202 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TGIF2Q9GZN2 237 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 PSME4Q14997 1843 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TO15178 435 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF17P17021 662 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 MPGP29372 298 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 GNB1P62873 340 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TMEM211Q6ICI0 200 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ASB5Q8WWX0 329 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 C10orf35Q96D05 121 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 GPR35Q9HC97 309 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 HIF1ANQ9NWT6 349 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TAGLN2P37802 199 aaKnown RBP13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF816Q0VGE8 651 aaPredicted RBP13.59□□□□□ -0.23
TIMP3-201ENST00000266085 PPP1R1AQ13522 171 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZPLD1Q8TCW7 415 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ST8SIA2Q92186 375 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 SMCO4Q9NRQ5 59 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 RFPL4AA6NLU0 287 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF705FA8MVS1 300 aaPredicted RBP13.59□□□□□ -0.23
TIMP3-201ENST00000266085 RFPL4AL1F8VTS6 287 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 M0R1X1 148 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 TIAF1O95411 115 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF705DP0CH99 300 aaPredicted RBP13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ZNF705BP0CI00 300 aaPredicted RBP13.59□□□□□ -0.23
TIMP3-201ENST00000266085 C11orf91Q3C1V1 193 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 C11orf87Q6NUJ2 197 aa13.59□□□□□ -0.23
TIMP3-201ENST00000266085 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms