RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 COX5BP10606 129 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 C4BPBP20851 252 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 CD34P28906 385 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SNRPD2P62316 118 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 RPS27AP62979 156 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 FAM27E3Q08E93 113 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 UNC119Q13432 240 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 KLF9Q13886 244 aaPredicted RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 PAN3Q58A45 887 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 C17orf107Q6ZR85 190 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 OR2Z1Q8NG97 314 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 OR4D10Q8NGI6 311 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SNRNP40Q96DI7 357 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 POM121L2Q96KW2 1035 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 CLCF1Q9UBD9 225 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 MPC1Q9Y5U8 109 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 hCG_38984A0A1B0GV85 526 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 K7ENP7 123 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SIRPB1O00241 398 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 CDIPTO14735 213 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 RBMXP38159 391 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 ERVS71-1P61550 626 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 BAMBIQ13145 260 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 TMEM255AQ5JRV8 349 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 FOXL2NBQ6ZUU3 175 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 ZNF488Q96MN9 340 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SOSTQ9BQB4 213 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 C1QTNF5Q9BXJ0 243 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 KCNIP3Q9Y2W7 256 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 ATP23Q9Y6H3 246 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 V9GYS6 101 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SPRY3O43610 288 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 IRF2P14316 349 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 ZNF16P17020 682 aaPredicted RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 FUT3P21217 361 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SLC9A3R2Q15599 337 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 GABRA6Q16445 453 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 RSPO1Q2MKA7 263 aaPredicted RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 OLFML2AQ68BL7 652 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 IGFL2Q6UWQ7 119 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 IGFL3Q6UXB1 125 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 RPRMLQ8N4K4 120 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 OR52B4Q8NGK2 314 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 FAM57AQ8TBR7 257 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 GPX8Q8TED1 209 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 SYT3Q9BQG1 590 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 POFUT1Q9H488 388 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 MOV10Q9HCE1 1003 aaKnown RBP8.05□□□□□ -1.12
SSR3-201ENST00000265044 DYNLRB1Q9NP97 96 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 FREM2Q5SZK8 3169 aa8.05□□□□□ -1.12
SSR3-201ENST00000265044 LOC390937A0A1W2PQ73 354 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 OR5H1A6NKK0 313 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 GLI4P10075 376 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 CBR1P16152 277 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 TNFSF4P23510 183 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 OTX1P32242 354 aaPredicted RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 C17orf78Q8N4C9 275 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 C12orf45Q8N5I9 185 aaPredicted RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 TMEM229BQ8NBD8 167 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 MARCH1Q8TCQ1 289 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 PTX4Q96A99 478 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 OSGIN2Q9Y236 505 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 EXPH5Q8NEV8 1989 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 C16orf97H3BN30 126 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 SIX6O95475 246 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 GLRA1P23415 457 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 HIST1H3AP68431 136 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 MZT1Q08AG7 82 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 RBM39Q14498 530 aaKnown RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 ACTBL2Q562R1 376 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 HIST2H3PS2Q5TEC6 136 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 ASPHD2Q6ICH7 369 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 HIST2H3AQ71DI3 136 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 PAQR4Q8N4S7 273 aaPredicted RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 DRAXINQ8NBI3 349 aaPredicted RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 OR5A2Q8NGI9 324 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 PECRQ9BY49 303 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 ATPIF1Q9UII2 106 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 KCNK7Q9Y2U2 307 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 AMDHD2Q9Y303 409 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 BOLA1Q9Y3E2 137 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 FAM208BQ5VWN6 2430 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 SPG11Q96JI7 2443 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 MEX3AA1L020 520 aaKnown RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 DHRS7CA6NNS2 312 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 TMEM14DPA8MWL7 114 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 CCL21O00585 134 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 FABP7O15540 132 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 TK1P04183 234 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 SFTPBP07988 381 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 HOXD4P09016 255 aaPredicted RBP8.04□□□□□ -1.12
SSR3-201ENST00000265044 BCL3P20749 454 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 CCL1P22362 96 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 CEACAM21Q3KPI0 293 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 TMEM108Q6UXF1 575 aa8.04□□□□□ -1.12
SSR3-201ENST00000265044 NCCRP1Q6ZVX7 275 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms