RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GDF15Q99988 308 aa12.38□□□□□ -0.43
CDH3-201ENST00000264012 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 FABP1P07148 127 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 MGST1P10620 155 aaKnown RBP12.37□□□□□ -0.43
CDH3-201ENST00000264012 CD37P11049 281 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 MICBQ29980 383 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 TMEM91Q6ZNR0 172 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 CORO2AQ92828 525 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ERGIC1Q969X5 290 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
CDH3-201ENST00000264012 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
CDH3-201ENST00000264012 CBR1P16152 277 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 SLC6A1P30531 599 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ZXDAP98168 799 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ABHD3Q8WU67 409 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 PRRX2Q99811 253 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 TMPRSS13Q9BYE2 586 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 OR5B21A6NL26 309 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 RPUSD3Q6P087 351 aaKnown RBP12.37□□□□□ -0.43
CDH3-201ENST00000264012 RFESDQ8TAC1 157 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ZPLD1Q8TCW7 415 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 RAB33BQ9H082 229 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 KIAA1456Q9P272 454 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 CST7O76096 145 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ACTL6AO96019 429 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 KRASP01116 189 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ZBTB25P24278 435 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 MLF1P58340 268 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ERHP84090 104 aaKnown RBP12.37□□□□□ -0.43
CDH3-201ENST00000264012 SLC26A10Q8NG04 563 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 OR10V1Q8NGI7 309 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ZNF75AQ96N20 296 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 ARID2Q68CP9 1835 aa12.37□□□□□ -0.43
CDH3-201ENST00000264012 TRAV8-7A0A075B6U6 113 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 B4E171 279 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 CST2P09228 141 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 TSPAN7P41732 249 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 RAB13P51153 203 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 PDZK1IP1Q13113 114 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 C14orf79Q96F83 325 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 UMAD1C9J7I0 102 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 GPR37O15354 613 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 SFT2D2O95562 160 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 NGFRP08138 427 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 ADH4P08319 380 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 MPC1Q9Y5U8 109 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 INHBBP09529 407 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 TMIGD3P0DMS9 266 aaPredicted RBP12.36□□□□□ -0.43
CDH3-201ENST00000264012 ZP3P21754 424 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 STARD6P59095 220 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 ASB5Q8WWX0 329 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
CDH3-201ENST00000264012 RGPD3A6NKT7 1758 aaPredicted RBP12.36□□□□□ -0.43
CDH3-201ENST00000264012 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
CDH3-201ENST00000264012 M0R1X1 148 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 SPTBP11277 2137 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 CEACAM6P40199 344 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 MMP16P51512 607 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 OR10Z1Q8NGY1 313 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 WFDC6Q9BQY6 131 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 ZNF71Q9NQZ8 489 aaPredicted RBP12.36□□□□□ -0.43
CDH3-201ENST00000264012 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 TMED3Q9Y3Q3 217 aa12.36□□□□□ -0.43
CDH3-201ENST00000264012 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 CTDSPLO15194 276 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 NDUFB3O43676 98 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 CYC1P08574 325 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 COX5AP20674 150 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 C1QTNF12Q5T7M4 302 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 SLC36A1Q7Z2H8 476 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 PINX1Q96BK5 328 aaKnown RBP12.35□□□□□ -0.43
CDH3-201ENST00000264012 CYB5R1Q9UHQ9 305 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 GSTZ1O43708 216 aaPredicted RBP12.35□□□□□ -0.43
CDH3-201ENST00000264012 SCO1O75880 301 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 LIMS1P48059 325 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 ADAM5Q6NVV9 412 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 PIK3IP1Q96FE7 263 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 PTPRFP10586 1907 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 DCTN6O00399 190 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 DNPH1O43598 174 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 YIF1AO95070 293 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 NPBWR1P48145 328 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
CDH3-201ENST00000264012 TMEM41BQ5BJD5 291 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 LRRC10Q5BKY1 277 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 TMEM108Q6UXF1 575 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms