RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TP53I11O14683 189 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 FAM157CP0CG43 387 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 CD79AP11912 226 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 AFF3P51826 1226 aaKnown RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 SPACA9Q96E40 222 aaPredicted RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 RSRP1Q9BUV0 290 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 HSPB6O14558 160 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 TRAPPC6AO75865 159 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 OR13C7P0DN81 318 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 GSK3AP49840 483 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 F2RL1P55085 397 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 SUMO3P55854 103 aaPredicted RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 SLC35A1P78382 337 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 ACER2Q5QJU3 275 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 PHYHD1Q5SRE7 291 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 C9orf135Q5VTT2 229 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 ZNF574Q6ZN55 896 aaPredicted RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 NFAM1Q8NET5 270 aaPredicted RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 OR2M3Q8NG83 312 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 BORCS8Q96FH0 119 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 LYZL4Q96KX0 146 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 PRRX2Q99811 253 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 ZNF442Q9H7R0 627 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 KLK3P07288 261 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 OR5AC1P0C628 307 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 HKR1P10072 659 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 ZNF708P17019 499 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 MSX1P28360 303 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 CAV2P51636 162 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 CCL7P80098 99 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 MIDNQ504T8 468 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 PPP1R3BQ86XI6 285 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 OR9K2Q8NGE7 335 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 PIGCQ92535 297 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 ERGIC1Q969X5 290 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SLAMF9Q96A28 289 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 CLCC1Q96S66 551 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SEC11CQ9BY50 192 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 DMDP11532 3685 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 C9JQL5 133 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 TNFSF11O14788 317 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 DHRS3O75911 302 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 ZNF728P0DKX0 622 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 NOVA1P51513 510 aaKnown RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 NAAAQ02083 359 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 ADAM5Q6NVV9 412 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 LYZL2Q7Z4W2 148 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 C17orf82Q86X59 251 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 POC1AQ8NBT0 407 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 RAB33BQ9H082 229 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 RCC2Q9P258 522 aaKnown RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 PTRH2Q9Y3E5 179 aaKnown RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 RP1L1Q8IWN7 2480 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 A0A1B0GV90 55 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 DHHO43323 396 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 TNFSF12O43508 249 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 CD63P08962 238 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 NQO2P16083 231 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 OR2B8PP59922 312 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SSTP61278 116 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 MST1LQ2TV78 715 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SLC22A25Q6T423 547 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 FBXW12Q6X9E4 464 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 EDARADDQ8WWZ3 215 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 ALKBH3Q96Q83 286 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 ZNF700Q9H0M5 742 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 CHRDQ9H2X0 955 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 C19orf25Q9UFG5 118 aaPredicted RBP11.07□□□□□ -0.64
LIG1-201ENST00000263274 OSGIN2Q9Y236 505 aa11.07□□□□□ -0.64
LIG1-201ENST00000263274 PHF1O43189 567 aaPredicted RBP11.06□□□□□ -0.64
LIG1-201ENST00000263274 OR7C1O76099 320 aaPredicted RBP11.06□□□□□ -0.64
LIG1-201ENST00000263274 SRFP11831 508 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 ZNF84P51523 738 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 DTX1Q86Y01 620 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 SPTSSAQ969W0 71 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 AQP10Q96PS8 301 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 METTL9Q9H1A3 318 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
LIG1-201ENST00000263274 FIGNL2A6NMB9 653 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 ARG1P05089 322 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 RPP30P78346 268 aaKnown RBP11.06□□□□□ -0.64
LIG1-201ENST00000263274 PIGYQ3MUY2 71 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 OR2B11Q5JQS5 317 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms