RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 FGGYQ96C11 551 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 HAO2Q9NYQ3 351 aa12.55□□□□□ -0.4
SCARF1-201ENST00000263071 RAB27BO00194 218 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 SLC33A1O00400 549 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-201ENST00000263071 UTS2O95399 124 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 CTLA4P16410 223 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 IL11P20809 199 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 RAB38P57729 211 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 LCN10Q6JVE6 187 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 CMTM1Q8IZ96 169 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 CST11Q9H112 138 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 SERTAD3Q9UJW9 196 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-201ENST00000263071 TRAPPC6BQ86SZ2 158 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 SEH1LQ96EE3 360 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 MRGPRX1Q96LB2 322 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 VSTM2LQ96N03 204 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 FRYLO94915 3013 aa12.54□□□□□ -0.4
SCARF1-201ENST00000263071 SDCBPO00560 298 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-201ENST00000263071 KNG1P01042 644 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 TNFP01375 233 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 SERPINA2P20848 420 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 CEBPEQ15744 281 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 PRAMEF20Q5VT98 475 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 NT5CQ8TCD5 201 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 IL19Q9UHD0 177 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 ETV7Q9Y603 341 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 K7EP13 123 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 OR5H8P0DN80 308 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 FCARP24071 287 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 NSDHLQ15738 373 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 DEFB133Q30KQ1 61 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 WBP2NLQ6ICG8 309 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF679Q8IYX0 411 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 PHF3Q92576 2039 aaKnown RBP12.53□□□□□ -0.4
SCARF1-201ENST00000263071 TOMM40LQ969M1 308 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-201ENST00000263071 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 SLC7A11Q9UPY5 501 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 MRPS18BQ9Y676 258 aaKnown RBP12.53□□□□□ -0.4
SCARF1-201ENST00000263071 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 TSPAN2O60636 221 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 PPBPP02775 128 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 P4HA3Q7Z4N8 544 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 MRPL52Q86TS9 123 aaKnown RBP12.53□□□□□ -0.4
SCARF1-201ENST00000263071 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 ST6GALNAC5Q9BVH7 336 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 LYRM4Q9HD34 91 aa12.53□□□□□ -0.4
SCARF1-201ENST00000263071 F6UZH7 168 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 PRAMEF26H0Y7S4 382 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 BPNT1O95861 308 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 MPIG6BO95866 241 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 CST4P01036 141 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 ALOX5APP20292 161 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.4
SCARF1-201ENST00000263071 TUBG1P23258 451 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 CTHP32929 405 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 HRH1P35367 487 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 PPICP45877 212 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 SLC6A9P48067 706 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 GABRA4P48169 554 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 ARFRP1Q13795 201 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.4
SCARF1-201ENST00000263071 TBX15Q96SF7 602 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 SLC2A8Q9NY64 477 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.4
SCARF1-201ENST00000263071 OBSL1O75147 1896 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 AHCTF1Q8WYP5 2266 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 TAAR5O14804 337 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 SRPX2O60687 465 aaPredicted RBP12.52□□□□□ -0.41
SCARF1-201ENST00000263071 HLA-GP17693 338 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 EGR4Q05215 589 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 PMPCAQ10713 525 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 C4orf45Q96LM5 186 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 LOC100289279A0A1B0GTE1 492 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 H0YIZ8 118 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 H0YL77 283 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 OR10J1P30954 320 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 PLCXD2Q0VAA5 305 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 SLC18B1Q6NT16 456 aa12.52□□□□□ -0.41
SCARF1-201ENST00000263071 KMT5CQ86Y97 462 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms