RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PRR14LQ5THK1 2151 aa11.79□□□□□ -0.52
VMP1-201ENST00000262291 CUL9Q8IWT3 2517 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 C5orf49A4QMS7 147 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 OR6C65A6NJZ3 312 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 CRYBA1P05813 215 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 GIPP09681 153 aaPredicted RBP11.78□□□□□ -0.52
VMP1-201ENST00000262291 ZNF35P13682 527 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 HRH1P35367 487 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 H2BFSP57053 126 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 DHODHQ02127 395 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 PIGCQ92535 297 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 RAB3CQ96E17 227 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 POFUT1Q9H488 388 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 TM4SF5O14894 197 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 MGMTP16455 207 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 GABRR1P24046 479 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 RAP2BP61225 183 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 EIF4E3Q8N5X7 224 aaKnown RBP11.78□□□□□ -0.52
VMP1-201ENST00000262291 PNLDC1Q8NA58 520 aaKnown RBP11.78□□□□□ -0.52
VMP1-201ENST00000262291 KCNG3Q8TAE7 436 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 SSC4DQ8WTU2 575 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 PTX4Q96A99 478 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 MIOXQ9UGB7 285 aa11.78□□□□□ -0.52
VMP1-201ENST00000262291 ZNF735P0CB33 412 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 PRF1P14222 555 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 GSK3AP49840 483 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 RAG2P55895 527 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 CLN3Q13286 438 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 IGFBP7Q16270 282 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 TMEM229BQ8NBD8 167 aa11.77□□□□□ -0.52
VMP1-201ENST00000262291 ZNF629Q9UEG4 869 aaPredicted RBP11.77□□□□□ -0.52
VMP1-201ENST00000262291 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 PTAFRP25105 342 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 PCBD1P61457 104 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 CXADRP78310 365 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 TSC22D1Q15714 1073 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 MOB3CQ70IA8 216 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 SLC36A1Q7Z2H8 476 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 MUC20Q8N307 709 aaPredicted RBP11.77□□□□□ -0.53
VMP1-201ENST00000262291 TMEM178AQ8NBL3 297 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 S100A13Q99584 98 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 ST6GALNAC5Q9BVH7 336 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 DLL3Q9NYJ7 618 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 LUZP4Q9P127 313 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 DMXL2Q8TDJ6 3036 aa11.77□□□□□ -0.53
VMP1-201ENST00000262291 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 CREBL2O60519 120 aaPredicted RBP11.76□□□□□ -0.53
VMP1-201ENST00000262291 HTR3BO95264 441 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 NGFP01138 241 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 BLVRBP30043 206 aaPredicted RBP11.76□□□□□ -0.53
VMP1-201ENST00000262291 FAM3AP98173 230 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 BHLHE23Q8NDY6 225 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 GLYATL2Q8WU03 294 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 EDARADDQ8WWZ3 215 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 HDHD3Q9BSH5 251 aaPredicted RBP11.76□□□□□ -0.53
VMP1-201ENST00000262291 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 SULT1C2O00338 296 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 CD82P27701 267 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 CALCRP30988 508 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 SORDQ00796 357 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 RNASE10Q5GAN6 216 aaKnown RBP11.76□□□□□ -0.53
VMP1-201ENST00000262291 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 PP6455Q8WZ26 134 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 DYRK2Q92630 601 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 ACKR4Q9NPB9 350 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 OPN4Q9UHM6 478 aa11.76□□□□□ -0.53
VMP1-201ENST00000262291 GOSR2O14653 212 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 NRASP01111 189 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
VMP1-201ENST00000262291 ADCYAP1P18509 176 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 SNU13P55769 128 aaKnown RBP11.75□□□□□ -0.53
VMP1-201ENST00000262291 RAB1AP62820 205 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 BEX5Q5H9J7 111 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 ZNF626Q68DY1 528 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 LIN54Q6MZP7 749 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 C6orf201Q7Z4U5 140 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 RXFP4Q8TDU9 374 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
VMP1-201ENST00000262291 A0A0A6YYH2 397 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 TMEM82A0PJX8 343 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 A6NJ64 397 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 ZNF850A8MQ14 1090 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 ACTL6AO96019 429 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 S100A9P06702 114 aaKnown RBP11.75□□□□□ -0.53
VMP1-201ENST00000262291 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
VMP1-201ENST00000262291 P4HA3Q7Z4N8 544 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms