RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 IGHV3-15A0A0B4J1V0 119 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 A8MWP6 167 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 EDN3P14138 238 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 EIF1AXP47813 144 aaKnown RBP16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACTA2P62736 377 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACTG2P63267 376 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SIRPAP78324 504 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 HSF1Q00613 529 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACTBL2Q562R1 376 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 STEAP1BQ6NZ63 245 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SYS1Q8N2H4 156 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 NPEPL1Q8NDH3 523 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 OR10J5Q8NHC4 309 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZPLD1Q8TCW7 415 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 FOXRED1Q96CU9 486 aaPredicted RBP16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SEC22AQ96IW7 307 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 UCN2Q96RP3 112 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SUCNR1Q9BXA5 334 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SELENOIQ9C0D9 397 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZDHHC8Q9ULC8 765 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 FLVCR1Q9Y5Y0 555 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 PPP1R2P9O14990 202 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 CXCL13O43927 109 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 CDKN2AP42771 156 aaKnown RBP16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SLC6A9P48067 706 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 SULT1A1P50225 295 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 DHRS2Q13268 280 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 LEG1Q6P5S2 330 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 HEPN1Q6WQI6 88 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 CD163Q86VB7 1156 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF519Q8TB69 540 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 ADGRL4Q9HBW9 690 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 CYTL1Q9NRR1 136 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 HAO2Q9NYQ3 351 aa16.56■□□□□ 0.24
COL4A3BP-201ENST00000261415 TRBV2A0A0J9YWF9 115 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 TVP23AA6NH52 213 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 NPIPB13A6NJU9 1138 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 NPIPB4C9JG80 1138 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 IGHG3P01860 377 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 MPZP25189 248 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 SLC16A1P53985 500 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 SLC35D2Q76EJ3 337 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 UEVLDQ8IX04 471 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 PRR18Q8N4B5 295 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 OXGR1Q96P68 337 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 SPRR3Q9UBC9 169 aa16.55■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF587BE7ETH6 402 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 NPIPA5E9PKD4 350 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 SMAD9O15198 467 aaKnown RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 FAM87AP0C7U9 286 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 CLUP10909 449 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 DAP3P51398 398 aaKnown RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 SRYQ05066 204 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPUSD3Q6P087 351 aaKnown RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 BTNL8Q6UX41 500 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 TMED4Q7Z7H5 227 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 ASB10Q8WXI3 467 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 OPN3Q9H1Y3 402 aaPredicted RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 SIRT7Q9NRC8 400 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 MED29Q9NX70 200 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 NPIPA1Q9UND3 350 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 TRBV6-7A0A0A0MS04 114 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 LOC102725191A0A1B0GVB3 256 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 H7C1C5 153 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 XKRYO14609 159 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 MRPL3P09001 348 aaKnown RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 SLC2A5P22732 501 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 G0S2P27469 103 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 PSMB6P28072 239 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 CLDN12P56749 244 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACTBP60709 375 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 LCN6P62502 163 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 ACTG1P63261 375 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF845Q96IR2 970 aaPredicted RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 OR51V1Q9H2C8 321 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF71Q9NQZ8 489 aaPredicted RBP16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 PARP11Q9NR21 331 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 KLHL13Q9P2N7 655 aa16.54■□□□□ 0.24
COL4A3BP-201ENST00000261415 A0A0B4J2A0 478 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 OR5H1A6NKK0 313 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 GYPBP06028 91 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 HTR2CP28335 458 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 RPS10P46783 165 aaKnown RBP16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 NMNAT2Q9BZQ4 307 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 LUZP4Q9P127 313 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 SHPKQ9UHJ6 478 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 MED12LQ86YW9 2145 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 TMEM8BA6NDV4 472 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF726A6NNF4 738 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 C9JQL5 133 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 VAMP5O95183 116 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 CD3DP04234 171 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 LINC00614P0C842 121 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 ZNF43P17038 809 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 TAS2R19P59542 299 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 DTD1Q8TEA8 209 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 ASB17Q8WXJ9 295 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 DCUN1D4Q92564 292 aa16.53■□□□□ 0.24
COL4A3BP-201ENST00000261415 GOLT1BQ9Y3E0 138 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms