RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 EDN3P14138 238 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 GFRA1P56159 465 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 ZXDAP98168 799 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 BAP18Q8IXM2 172 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 OR10AD1Q8NGE0 317 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 DNTTIP1Q9H147 329 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 TIMM10BQ9Y5J6 103 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 COL27A1Q8IZC6 1860 aaPredicted RBP16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 SHANK1Q9Y566 2161 aa16.68■□□□□ 0.26
LPCAT3-201ENST00000261407 PRRC2CQ9Y520 2896 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 DNPH1O43598 174 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 OR5H8P0DN80 308 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 CCL2P13500 99 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 RBM39Q14498 530 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 ZNF273Q14593 569 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 SSPNQ14714 243 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 KRTAP27-1Q3LI81 207 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 SP6Q3SY56 376 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 TSPO2Q5TGU0 170 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 CDCP2Q5VXM1 449 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 H3F3CQ6NXT2 135 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 FBXL14Q8N1E6 418 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 STOML3Q8TAV4 291 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 PIGCQ92535 297 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 TOMM40LQ969M1 308 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 LRRC46Q96FV0 321 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 THOC3Q96J01 351 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 SIGLEC12Q96PQ1 595 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 C14orf166Q9Y224 244 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 FAM186AA6NE01 2351 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 KNTC1P50748 2209 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 TRIM77I1YAP6 450 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 ICAM2P13598 275 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 TPT1P13693 172 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 ACP1P24666 158 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 SPEM2Q0P670 501 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 ZNF585AQ6P3V2 769 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 Q6ZPA2 131 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 RAB11FIP2Q7L804 512 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 CALHM1Q8IU99 346 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 CMSS1Q9BQ75 279 aaKnown RBP16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 LDAHQ9H6V9 325 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
LPCAT3-201ENST00000261407 SPENQ96T58 3664 aaKnown RBP16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 A0A096LPE4 126 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 hCG_38984A0A1B0GV85 526 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 A0A1W2PNU3 283 aaPredicted RBP16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 A0A1W2PPZ6 126 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 ZNF850A8MQ14 1090 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 IFNA2P01563 188 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 AIMP2Q13155 320 aaKnown RBP16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 OR2A2Q6IF42 318 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 C5orf24Q7Z6I8 188 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 SLC30A7Q8NEW0 376 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 MARC2Q969Z3 335 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 ZNF407Q9C0G0 2248 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 ACTL6AO96019 429 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 FCGR3AP08637 254 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 LYL1P12980 280 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 CHATP28329 748 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 CNN3Q15417 329 aaKnown RBP16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 PABPC1L2AQ5JQF8 200 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 TMEM42Q69YG0 159 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 CRIM1Q9NZV1 1036 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 FOXJ2Q9P0K8 574 aa16.66■□□□□ 0.26
LPCAT3-201ENST00000261407 C9orf172C9J069 976 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 FGF16O43320 207 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 IGHEP01854 428 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 SERPINA7P05543 415 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 MMP7P09237 267 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 RCC1P18754 421 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 CCNOP22674 350 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 FXYD4P59646 89 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 IAH1Q2TAA2 248 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 MRPL24Q96A35 216 aaKnown RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 ST3GAL6Q9Y274 331 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DNAJC13O75165 2243 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 A0A1B0GW55 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 FAM74A7A6NL05 159 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 CYTIPO60759 359 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 FAM157CP0CG43 387 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L2P0CJ85 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L3P0CJ86 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L4P0CJ87 422 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L5P0CJ88 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L6P0CJ89 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4L7P0CJ90 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 NPBWR2P48146 333 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DAZAP2Q15038 168 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 PLEKHN1Q494U1 663 aaPredicted RBP16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 FAM74A3Q4VXF1 159 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 LHFPL5Q8TAF8 219 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 SLC5A7Q9GZV3 580 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 ARRDC1-AS1Q9H2J1 176 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 DUX4Q9UBX2 424 aa16.65■□□□□ 0.26
LPCAT3-201ENST00000261407 URB1O60287 2271 aaKnown RBP16.64■□□□□ 0.25
LPCAT3-201ENST00000261407 DOCK7Q96N67 2140 aa16.64■□□□□ 0.25
LPCAT3-201ENST00000261407 RRP8O43159 456 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms