RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 Q96MT0 163 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 PHB2Q99623 299 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 NAA50Q9GZZ1 169 aaKnown RBP3.03□□□□□ -1.92
CCDC54-201ENST00000261058 ING2Q9H160 280 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 ARV1Q9H2C2 271 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 OR51J1Q9H342 316 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 BOLA2Q9H3K6 86 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 MCUBQ9NWR8 336 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 GLTPQ9NZD2 209 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 RPL26L1Q9UNX3 145 aaKnown RBP3.03□□□□□ -1.92
CCDC54-201ENST00000261058 SNX24Q9Y343 169 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 NUP153P49790 1475 aaKnown RBP3.03□□□□□ -1.92
CCDC54-201ENST00000261058 MAGI1Q96QZ7 1491 aaPredicted RBP3.03□□□□□ -1.92
CCDC54-201ENST00000261058 MEGF6O75095 1541 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 ABCA10Q8WWZ4 1543 aa3.03□□□□□ -1.92
CCDC54-201ENST00000261058 KTN1Q86UP2 1357 aaKnown RBP3.03□□□□□ -1.92
CCDC54-201ENST00000261058 A0A0G2JRQ6 117 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 A0A1B0GVI7 797 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 VSTM2BA6NLU5 285 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SEC14L6B5MCN3 397 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 FTCDNL1E5RQL4 147 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 H7C2Y5 167 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SULT1C2O00338 296 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 GGCTO75223 188 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 MPDU1O75352 247 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RP2O75695 350 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TRAPPC6AO75865 159 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR2J2O76002 312 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TTC4O95801 387 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR10J4P0C629 311 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RBM34P42696 430 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 PSMD8P48556 350 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RPL26P61254 145 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SLC7A9P82251 487 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 UNC119Q13432 240 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CDK10Q15131 360 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TRAM1Q15629 374 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TAL2Q16559 108 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ACSM3Q53FZ2 586 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 HSD17B12Q53GQ0 312 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CARD16Q5EG05 197 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OGFRL1Q5TC84 451 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 UBE2UQ5VVX9 321 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 XKRXQ6PP77 449 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF547Q8IVP9 402 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 C10orf107Q8IVU9 208 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 WDFY1Q8IWB7 410 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RIMKLAQ8IXN7 391 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 LRRC52Q8N7C0 313 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR13D1Q8NGV5 346 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR51F2Q8NH61 342 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CASTOR1Q8WTX7 329 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM234Q8WY98 164 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CHCHD10Q8WYQ3 142 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 YIPF6Q96EC8 236 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OXGR1Q96P68 337 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR5B12Q96R08 314 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TBX15Q96SF7 602 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RETNQ9HD89 108 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SH2D2AQ9NP31 389 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SPANXA1Q9NS26 97 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 NLE1Q9NVX2 485 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RSL24D1Q9UHA3 163 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ANGPT4Q9Y264 503 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 FARSAQ9Y285 508 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 HSPB11Q9Y547 144 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ABCB11O95342 1321 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 BAZ1AQ9NRL2 1556 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CARMIL3Q8ND23 1372 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 THSD7BQ9C0I4 1608 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 A0A0B4J2E0 115 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 A0A1B0GX12 115 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 LINC00862A6NCI5 91 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 LYRM9A8MSI8 78 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 PANO1I0J062 215 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CCL21O00585 134 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 PLPP1O14494 284 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RGS5O15539 181 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ERI3O43414 337 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TPST1O60507 370 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CDC40O60508 579 aaKnown RBP eCLIP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 HPGDSO60760 199 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 UGT2B11O75310 529 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 EEDO75530 441 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 MMP23AO75900 390 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 IGLV1-47P01700 117 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TSPAN19P0C672 248 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR8U9P0C7N5 309 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF25P17030 456 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RFC3P40938 356 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 AKR1C3P42330 323 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RPS9P46781 194 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 DNAJB13P59910 316 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RPS20P60866 119 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms