RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 CYB5AP00167 134 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 AGAP20933 346 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 GRNP28799 593 aaKnown RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 NPBWR2P48146 333 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 CDNFQ49AH0 187 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 PLAC9Q5JTB6 97 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 ZNF57Q68EA5 555 aaPredicted RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 ELP2Q6IA86 826 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 HAGHLQ6PII5 290 aaPredicted RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 VHLLQ6RSH7 139 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 SLC22A25Q6T423 547 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 GDPD3Q7L5L3 318 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 WDR86Q86TI4 376 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 OSR2Q8N2R0 312 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 TOMM5Q8N4H5 51 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 SPERTQ8NA61 448 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 GPX8Q8TED1 209 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 RAB3CQ96E17 227 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 SEH1LQ96EE3 360 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 POM121Q96HA1 1249 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 C11orf54Q9H0W9 315 aaPredicted RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 ESRP2Q9H6T0 727 aaKnown RBP8.05□□□□□ -1.12
NIP7-202ENST00000254941 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.05□□□□□ -1.12
NIP7-202ENST00000254941 MTCH1Q9NZJ7 389 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 KCNK7Q9Y2U2 307 aa8.05□□□□□ -1.12
NIP7-202ENST00000254941 J3QT63 122 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 LYRM1O43325 122 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SYNGR1O43759 233 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 RBBP9O75884 186 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 LPLP06858 475 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 GSTP1P09211 210 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 HIST1H1DP16402 221 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 GNB3P16520 340 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 RFX2P48378 723 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SRP9P49458 86 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 SELENOVP59797 346 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 ZNF154Q13106 437 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 DYRK1AQ13627 763 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 KLF9Q13886 244 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 NCMAPQ5T1S8 102 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 Q6ZTK2 550 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 NRARPQ7Z6K4 114 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 SCCPDHQ8NBX0 429 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 CHST4Q8NCG5 386 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 OR10AD1Q8NGE0 317 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MRPL24Q96A35 216 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 BBC3Q96PG8 261 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 ZNF442Q9H7R0 627 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MSL2Q9HCI7 577 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 RBFOX1Q9NWB1 397 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 NKIRAS2Q9NYR9 191 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ELF5Q9UKW6 265 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 MYO18BQ8IUG5 2567 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ANKRD20A5PA0PJZ0 165 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 TUBAL3A6NHL2 446 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 B8ZZF3 427 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 TRAPPC2LH3BP13 241 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MFNGO00587 321 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ECDO95905 644 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 GSTT2BP0CG30 244 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 BCL3P20749 454 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 BLVRBP30043 206 aaPredicted RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 RBM11P57052 281 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 AP3S2P59780 193 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 FGF12P61328 243 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MAB21L1Q13394 359 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SNTB1Q13884 538 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 TAF9Q16594 264 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 PIGYQ3MUY2 71 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 NHLRC3Q5JS37 347 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SIGIRRQ6IA17 410 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MZT2BQ6NZ67 158 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 LINC01560Q8TB33 94 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 DEDD2Q8WXF8 326 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ARHGAP5-AS1Q96IT6 56 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 COX4I2Q96KJ9 171 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 SYT3Q9BQG1 590 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 MRPL37Q9BZE1 423 aaKnown RBP8.04□□□□□ -1.12
NIP7-202ENST00000254941 CXXC4Q9H2H0 198 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 RHOFQ9HBH0 211 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 TAS2R8Q9NYW2 309 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 ST3GAL6Q9Y274 331 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 POLDIP2Q9Y2S7 368 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 COL12A1Q99715 3063 aa8.04□□□□□ -1.12
NIP7-202ENST00000254941 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 ZNF462Q96JM2 2506 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 PLSCR5A0PG75 271 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 PRSS44E7EML9 344 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 F5H5P2 479 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 F8VVB4 439 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 F8VWA3 439 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms