RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 LRRC42Q9Y546 428 aa17.15■□□□□ 0.34
NEDD8-201ENST00000250495 PQLC2LA1A4F0 135 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 DHRS7CA6NNS2 312 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 KIR2DS4P43632 304 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 LGALS4P56470 323 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 EFNB1P98172 346 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 LY6EQ16553 131 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 AADACL4Q5VUY2 407 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 Q6ZTK2 550 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
NEDD8-201ENST00000250495 CALHM1Q8IU99 346 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 OR14K1Q8NGZ2 314 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 FAM110DQ8TAY7 271 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-201ENST00000250495 TMEM163Q8TC26 289 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 RORBQ92753 470 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 AJUBAQ96IF1 538 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 NRIP2Q9BQI9 281 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 VCX3BQ9H321 246 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 ADGRL4Q9HBW9 690 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 USE1Q9NZ43 259 aa17.14■□□□□ 0.33
NEDD8-201ENST00000250495 A0A1B0GTI1 187 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 MAGEB4O15481 346 aaPredicted RBP17.13■□□□□ 0.33
NEDD8-201ENST00000250495 TSPAN15O95858 294 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 CSF1P09603 554 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 Q6ZSR3 168 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 GID4Q8IVV7 300 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 C11orf42Q8N5U0 333 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 OR4M1Q8NGD0 313 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 OR4C13Q8NGP0 309 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 OR14J1Q9UGF5 321 aa17.13■□□□□ 0.33
NEDD8-201ENST00000250495 MRM2Q9UI43 246 aaKnown RBP17.13■□□□□ 0.33
NEDD8-201ENST00000250495 TET2Q6N021 2002 aaPredicted RBP17.13■□□□□ 0.33
NEDD8-201ENST00000250495 ZAR1LA6NP61 321 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 G3V2T6 193 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 TK1P04183 234 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 MPZP25189 248 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 ERVFRD-1P60508 538 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 HERPUD1Q15011 391 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 PPP1R35Q8TAP8 253 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 PKIBQ9C010 78 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 RANBP3Q9H6Z4 567 aaPredicted RBP17.12■□□□□ 0.33
NEDD8-201ENST00000250495 HES4Q9HCC6 221 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 ENOPH1Q9UHY7 261 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 SLC7A11Q9UPY5 501 aa17.12■□□□□ 0.33
NEDD8-201ENST00000250495 TGP01266 2768 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 A6NIN4 97 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 H3BNX3 289 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 CASQ2O14958 399 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-201ENST00000250495 MITFO75030 526 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-201ENST00000250495 KRT8P05787 483 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 CEBPDP49716 269 aaPredicted RBP17.11■□□□□ 0.33
NEDD8-201ENST00000250495 IL24Q13007 206 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 C12orf73Q69YU5 71 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 LIAT1Q6ZQX7 453 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 PLEKHG7Q6ZR37 379 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 YIPF7Q8N8F6 280 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 OR2T6Q8NHC8 308 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 NRG4Q8WWG1 115 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 PYDC1Q8WXC3 89 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 IL4I1Q96RQ9 567 aa17.11■□□□□ 0.33
NEDD8-201ENST00000250495 K7N7A8 449 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 M0R129 80 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 CCL3L1P16619 93 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 CCL1P22362 96 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 COX7A1P24310 79 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 EPHA2P29317 976 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 EFNB2P52799 333 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 ATP6AP1Q15904 470 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 KDM4DQ6B0I6 523 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 CRIP3Q6Q6R5 217 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 ANGPTL5Q86XS5 388 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 ZDHHC13Q8IUH4 622 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
NEDD8-201ENST00000250495 SLC22A13Q9Y226 551 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 SIGLEC9Q9Y336 463 aa17.1■□□□□ 0.33
NEDD8-201ENST00000250495 RPP14O95059 124 aaKnown RBP17.09■□□□□ 0.33
NEDD8-201ENST00000250495 CHRM2P08172 466 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 FASP25445 335 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 ERVK11-1P61568 191 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 ZNF273Q14593 569 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 BATF2Q8N1L9 274 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 CCDC54Q8NEL0 328 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 ADI1Q9BV57 179 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 NPFFR1Q9GZQ6 430 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 PLEKHA1Q9HB21 404 aa17.09■□□□□ 0.33
NEDD8-201ENST00000250495 FAM230AA0A1W2PPH8 454 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 C17orf98A8MV24 154 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 SYT7O43581 403 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 BAG2O95816 211 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 OR2T7P0C7T2 308 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 PAX6P26367 422 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 BMXP51813 675 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 COL10A1Q03692 680 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 PQLC1Q8N2U9 271 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
NEDD8-201ENST00000250495 OR13D1Q8NGV5 346 aa17.08■□□□□ 0.32
NEDD8-201ENST00000250495 TRMT10AQ8TBZ6 339 aaKnown RBP17.08■□□□□ 0.32
NEDD8-201ENST00000250495 A0A0G2JK05 382 aa17.07■□□□□ 0.32
NEDD8-201ENST00000250495 METTL15A6NJ78 407 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms