RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DUX4L6P0CJ89 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4L7P0CJ90 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 EDN3P14138 238 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 IL15RAQ13261 267 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 RAB32Q13637 225 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 PIGYQ3MUY2 71 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 PXDC1Q5TGL8 231 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 TSPO2Q5TGU0 170 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 PRSS54Q6PEW0 395 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 BRICD5Q6PL45 260 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 CPEB3Q8NE35 698 aaKnown RBP16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 C2orf50Q96LR7 162 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 HES7Q9BYE0 225 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 STRADBQ9C0K7 418 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 TAS2R3Q9NYW6 316 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 DUX4Q9UBX2 424 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 GEMIN2O14893 280 aaKnown RBP16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 SIGLEC5O15389 551 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 CHATP28329 748 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 OPRM1P35372 400 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 PCBD1P61457 104 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF100Q8IYN0 542 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 CPNE2Q96FN4 548 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 ACKR4Q9NPB9 350 aa16.94■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF205O95201 554 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 SFTPBP07988 381 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF883P0CG24 379 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 SRYQ05066 204 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 PABPC1L2AQ5JQF8 200 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 BOLLQ8N9W6 283 aaKnown RBP16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR10AD1Q8NGE0 317 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 CMSS1Q9BQ75 279 aaKnown RBP16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 DDA1Q9BW61 102 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 DECR2Q9NUI1 292 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF391Q9UJN7 358 aa16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 BOKQ9UMX3 212 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP1-201ENST00000249014 IFNA2P01563 188 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 FCGR3AP08637 254 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR5H8P0DN80 308 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR8B8Q15620 311 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZBTB44Q8NCP5 570 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR2M7Q8NG81 312 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 TMEM45BQ96B21 275 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 RGCCQ9H4X1 137 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF703Q9H7S9 590 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 GSKIPQ9P0R6 139 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 EDARQ9UNE0 448 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 AHCTF1Q8WYP5 2266 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 FBXL14Q8N1E6 418 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 SLC30A7Q8NEW0 376 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 OR1S2Q8NGQ3 325 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 PIGCQ92535 297 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 PCDHB10Q9UN67 800 aa16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 NOSIPQ9Y314 301 aaKnown RBP16.92■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNHIT1O43257 154 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 CTSDP07339 412 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 TPT1P13693 172 aaKnown RBP16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 LHX2P50458 406 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 PDZK1IP1Q13113 114 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 RBM39Q14498 530 aaKnown RBP16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 CDCP2Q5VXM1 449 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 BAP18Q8IXM2 172 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 OSR2Q8N2R0 312 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 MARS2Q96GW9 593 aaKnown RBP16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 SLC7A10Q9NS82 523 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 FAM221AA4D161 298 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 MRPL33O75394 65 aaKnown RBP16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 ECI1P42126 302 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 FUT6P51993 359 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 PDCD1Q15116 288 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 C9orf135Q5VTT2 229 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 PLCXD3Q63HM9 321 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 ATRAIDQ6UW56 229 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 TFAP2EQ6VUC0 442 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 BPIFCQ8NFQ6 507 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 AQP10Q96PS8 301 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 FAM173AQ9BQD7 235 aa16.91■□□□□ 0.3
CDC42EP1-201ENST00000249014 IGKV3D-15A0A087WSY6 115 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 FGF16O43320 207 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 APOC3P02656 99 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 DTYMKP23919 212 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 RBMXP38159 391 aaKnown RBP16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 CLDN18P56856 261 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 TAGLNQ01995 201 aaKnown RBP16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 NAAAQ02083 359 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 PLEKHN1Q494U1 663 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 CALHM1Q8IU99 346 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 C1QTNF5Q9BXJ0 243 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 C1orf123Q9NWV4 160 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 ST3GAL6Q9Y274 331 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF816-ZNF321PA0A0X1KG74 233 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 CRYM-AS1A6NIL9 109 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 ZNF850A8MQ14 1090 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 FARS2O95363 451 aaKnown RBP16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 S100A10P60903 97 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 SMUG1Q53HV7 270 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 PDSS1Q5T2R2 415 aa16.89■□□□□ 0.3
CDC42EP1-201ENST00000249014 TMEM200AQ86VY9 491 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms