RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 FAM74A3Q4VXF1 159 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 NKAPLQ5M9Q1 402 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 TMEM42Q69YG0 159 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 IL34Q6ZMJ4 242 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 GALNTL5Q7Z4T8 443 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 ABHD3Q8WU67 409 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 C2orf50Q96LR7 162 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 RTBDNQ9BSG5 229 aaPredicted RBP19.06■□□□□ 0.64
RNF39-201ENST00000244360 MEMO1Q9Y316 297 aa19.06■□□□□ 0.64
RNF39-201ENST00000244360 F10P00742 488 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 NRN1LQ496H8 165 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 ZNF100Q8IYN0 542 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 OR13G1Q8NGZ3 307 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 EMG1Q92979 244 aaKnown RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 RGCCQ9H4X1 137 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 MMP26Q9NRE1 261 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 CNTRLQ7Z7A1 2325 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 H0YIZ8 118 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 LCATP04180 440 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 PATE4P0C8F1 98 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 SNU13P55769 128 aaKnown RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 MTCP1P56278 107 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 SUPT4H1P63272 117 aaKnown RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 CNN3Q15417 329 aaKnown RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 FGFBP3Q8TAT2 258 aa19.05■□□□□ 0.64
RNF39-201ENST00000244360 RRNAD1Q96FB5 475 aaKnown RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 CPNE2Q96FN4 548 aaPredicted RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 ZNF629Q9UEG4 869 aaPredicted RBP19.05■□□□□ 0.64
RNF39-201ENST00000244360 C10orf91Q5T1B1 145 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 AADACL3Q5VUY0 350 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 ASCL4Q6XD76 172 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 CSNK2A3Q8NEV1 391 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 ADAMTS17Q8TE56 1095 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 SIGLEC12Q96PQ1 595 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 ST6GALNAC5Q9BVH7 336 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 NDRG3Q9UGV2 375 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 CARHSP1Q9Y2V2 147 aaKnown RBP19.04■□□□□ 0.64
RNF39-201ENST00000244360 MMP7P09237 267 aaPredicted RBP19.04■□□□□ 0.64
RNF39-201ENST00000244360 H2AFB1P0C5Y9 115 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 ABHD17BQ5VST6 288 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 SKA3Q8IX90 412 aa19.04■□□□□ 0.64
RNF39-201ENST00000244360 METTL8Q9H825 291 aaKnown RBP19.04■□□□□ 0.64
RNF39-201ENST00000244360 ELL3Q9HB65 397 aaPredicted RBP19.04■□□□□ 0.64
RNF39-201ENST00000244360 IGKV1-27A0A075B6S5 117 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 CDX4O14627 284 aaPredicted RBP19.03■□□□□ 0.64
RNF39-201ENST00000244360 TAAR5O14804 337 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 SIGLEC5O15389 551 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 LHX2P50458 406 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 EIF5AL1Q6IS14 154 aaKnown RBP19.03■□□□□ 0.64
RNF39-201ENST00000244360 CNTNAP3BQ96NU0 1288 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 METTL9Q9H1A3 318 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 EHFQ9NZC4 300 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 GPR179Q6PRD1 2367 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 MYO7BQ6PIF6 2116 aa19.03■□□□□ 0.64
RNF39-201ENST00000244360 hCG_38984A0A1B0GV85 526 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 ADAP1O75689 374 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 TMEM225BP0DP42 221 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 ANKRD55Q3KP44 614 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 TMEM164Q5U3C3 297 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 ZNF585AQ6P3V2 769 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 PLXDC2Q6UX71 529 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 POC1AQ8NBT0 407 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 SAT2Q96F10 170 aaPredicted RBP19.02■□□□□ 0.64
RNF39-201ENST00000244360 LINC00470Q9BZP3 86 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 B4GALT7Q9UBV7 327 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 C14orf166Q9Y224 244 aaKnown RBP19.02■□□□□ 0.64
RNF39-201ENST00000244360 KCNAB3O43448 404 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 NDUFA2O43678 99 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 CSTBP04080 98 aaKnown RBP19.02■□□□□ 0.64
RNF39-201ENST00000244360 LHFPL2Q6ZUX7 228 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 BOLLQ8N9W6 283 aaKnown RBP19.02■□□□□ 0.64
RNF39-201ENST00000244360 TMED6Q8WW62 240 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 MCTS1Q9ULC4 181 aaKnown RBP19.02■□□□□ 0.64
RNF39-201ENST00000244360 PRELID3BQ9Y3B1 194 aa19.02■□□□□ 0.64
RNF39-201ENST00000244360 CLDN18P56856 261 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 CHRFAM7AQ494W8 412 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 DCAF10Q5QP82 559 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.01■□□□□ 0.63
RNF39-201ENST00000244360 IQCF2Q8IXL9 164 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 SPAG16Q8N0X2 631 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 PUSL1Q8N0Z8 303 aaKnown RBP19.01■□□□□ 0.63
RNF39-201ENST00000244360 OR10Z1Q8NGY1 313 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 OR5AC2Q9NZP5 309 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 LPAR3Q9UBY5 353 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 ATPIF1Q9UII2 106 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 RRP8O43159 456 aaKnown RBP19.01■□□□□ 0.63
RNF39-201ENST00000244360 ACTL6AO96019 429 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 FAM157CP0CG43 387 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 RPS2P15880 293 aaKnown RBP19.01■□□□□ 0.63
RNF39-201ENST00000244360 ARHGDIBP52566 201 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 FAM3AP98173 230 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 OR8B8Q15620 311 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 TSPO2Q5TGU0 170 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 C6orf201Q7Z4U5 140 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 ABI3Q9P2A4 366 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 HSF4Q9ULV5 492 aa19.01■□□□□ 0.63
RNF39-201ENST00000244360 NOSIPQ9Y314 301 aaKnown RBP19.01■□□□□ 0.63
RNF39-201ENST00000244360 GPR31O00270 319 aa19■□□□□ 0.63
RNF39-201ENST00000244360 MT-CO3P00414 261 aa19■□□□□ 0.63
RNF39-201ENST00000244360 CELA3AP09093 270 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms