RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RAB11BQ15907 218 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 POC1AQ8NBT0 407 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 OR51D1Q8NGF3 324 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 FOXRED1Q96CU9 486 aaPredicted RBP16.93■□□□□ 0.3
SNRPA-201ENST00000243563 CYYR1Q96J86 154 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 NRIP2Q9BQI9 281 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 SMURF1Q9HCE7 757 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 STEAP1Q9UHE8 339 aa16.93■□□□□ 0.3
SNRPA-201ENST00000243563 TMEM178BH3BS89 294 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 SSX4O60224 188 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 SNRPBP14678 240 aaKnown RBP16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ATP5J2P56134 94 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 QRFPP83859 136 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 RIN1Q13671 783 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 IDNKQ5T6J7 187 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 TMEM104Q8NE00 496 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 RDH5Q92781 318 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 LIN7BQ9HAP6 207 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 BATF3Q9NR55 127 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ZNF581Q9P0T4 197 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 RNF7Q9UBF6 113 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ASH1LQ9NR48 2969 aaKnown RBP16.92■□□□□ 0.3
SNRPA-201ENST00000243563 VPS13CQ709C8 3753 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 IGHV3OR15-7A0A075B7D8 119 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 SRRM5B3KS81 715 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 KDM4BO94953 1096 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 VSIG8P0DPA2 414 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 UNC119Q13432 240 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 SLC22A6Q4U2R8 563 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 BIVMQ86UB2 503 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 PNLDC1Q8NA58 520 aaKnown RBP16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ZSCAN4Q8NAM6 433 aaPredicted RBP16.92■□□□□ 0.3
SNRPA-201ENST00000243563 PXT1Q8NFP0 134 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 OR5H6Q8NGV6 325 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ERGIC1Q969X5 290 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 CEP19Q96LK0 163 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 GSX2Q9BZM3 304 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 ELL3Q9HB65 397 aaPredicted RBP16.92■□□□□ 0.3
SNRPA-201ENST00000243563 OR5V1Q9UGF6 321 aa16.92■□□□□ 0.3
SNRPA-201ENST00000243563 NOS1APO75052 506 aaPredicted RBP16.91■□□□□ 0.3
SNRPA-201ENST00000243563 SERPINA2P20848 420 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 CFHR2P36980 270 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 EFNB2P52799 333 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 SNU13P55769 128 aaKnown RBP16.91■□□□□ 0.3
SNRPA-201ENST00000243563 ZNF181Q2M3W8 571 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 DEFB113Q30KQ7 82 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 SFRP4Q6FHJ7 346 aaPredicted RBP16.91■□□□□ 0.3
SNRPA-201ENST00000243563 MKXQ8IYA7 352 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 SAXO1Q8IYX7 474 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 OR10Z1Q8NGY1 313 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 FAM46BQ96A09 425 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 FAM3DQ96BQ1 224 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 CPNE2Q96FN4 548 aaPredicted RBP16.91■□□□□ 0.3
SNRPA-201ENST00000243563 BANF2Q9H503 90 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 HES4Q9HCC6 221 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 POLDIP2Q9Y2S7 368 aa16.91■□□□□ 0.3
SNRPA-201ENST00000243563 LDLRAD4O15165 306 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 DNASE1P24855 282 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 PSMD7P51665 324 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 CARTPTQ16568 116 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 HFEQ30201 348 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 C2orf76Q3KRA6 126 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 OR11L1Q8NGX0 322 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 ZNF671Q8TAW3 534 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 LGALS14Q8TCE9 139 aa16.9■□□□□ 0.3
SNRPA-201ENST00000243563 TMEM272A0A1B0GTI8 110 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 TRAPPC2LH3BP13 241 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 HTR3BO95264 441 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 RSU1Q15404 277 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 DGUOKQ16854 277 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 AVPI1Q5T686 147 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 CDH24Q86UP0 819 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 SLIRPQ9GZT3 109 aaKnown RBP16.89■□□□□ 0.29
SNRPA-201ENST00000243563 METTL9Q9H1A3 318 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 IL36GQ9NZH8 169 aa16.89■□□□□ 0.29
SNRPA-201ENST00000243563 TMEM14DPA8MWL7 114 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 BPNT1O95861 308 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 ACAA1P09110 424 aaPredicted RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 ARSBP15848 533 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 GLRA1P23415 457 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 CEBPDP49716 269 aaPredicted RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 RORCP51449 518 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 MRPS11P82912 194 aaKnown RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 ZMYND11Q15326 602 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 PIGYQ3MUY2 71 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 ACP7Q6ZNF0 438 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 RTN4RL2Q86UN3 420 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 DEFB108BQ8NET1 73 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 Q8NFD4 153 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 OR5T2Q8NGG2 359 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 EMG1Q92979 244 aaKnown RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 BEX4Q9NWD9 120 aaPredicted RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 CCDC59Q9P031 241 aaKnown RBP16.88■□□□□ 0.29
SNRPA-201ENST00000243563 NXPH2O95156 264 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 PRKACAP17612 351 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 DUSP1P28562 367 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 PDCD1Q15116 288 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 CNPY1Q3B7I2 92 aa16.88■□□□□ 0.29
SNRPA-201ENST00000243563 FAM90A1Q86YD7 464 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms