RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MRPL54Q6P161 138 aaKnown RBP6.71□□□□□ -1.33
RIF1-201ENST00000243326 GJC3Q8NFK1 279 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 ALKBH3Q96Q83 286 aaPredicted RBP6.71□□□□□ -1.33
RIF1-201ENST00000243326 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 CTAG2O75638 210 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 NEURL1O76050 574 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 ADPRHP54922 357 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 PRR31Q5SQ13 230 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 IL5P05113 134 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 C16orf82Q7Z2V1 217 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 SOX7Q9BT81 388 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 NAGKQ9UJ70 344 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 VSIG4Q9Y279 399 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 NRAPQ86VF7 1730 aa6.71□□□□□ -1.33
RIF1-201ENST00000243326 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 VEGFBP49765 207 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 DUSP8Q13202 625 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 ZNF683Q8IZ20 524 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 TRAV8-7A0A075B6U6 113 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 A0A0A6YYD5 115 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 M0R1B8 84 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 SPRY3O43610 288 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 MASP2O00187 686 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 EGR3Q06889 387 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 SLC38A11Q08AI6 406 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 DRAM2Q6UX65 266 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 PPP1R3BQ86XI6 285 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
RIF1-201ENST00000243326 C1QL1O75973 258 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 IGHA1P01876 353 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 SHDQ96IW2 340 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 WSB1Q9Y6I7 421 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 TAAR5O14804 337 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 MYBPHQ13203 477 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
RIF1-201ENST00000243326 ABHD3Q8WU67 409 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 SLC46A1Q96NT5 459 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 RARRES2Q99969 163 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 UTP23Q9BRU9 249 aaKnown RBP6.71□□□□□ -1.34
RIF1-201ENST00000243326 MARVELD1Q9BSK0 173 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 KLK13Q9UKR3 277 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 H0YIG0 161 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 ENDOGQ14249 297 aaKnown RBP6.71□□□□□ -1.34
RIF1-201ENST00000243326 LDLRAD1Q5T700 205 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 KIR3DX1Q9H7L2 352 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 FCN1O00602 326 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 RUNX1Q01196 453 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 NHLH1Q02575 133 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 NHLH2Q02577 135 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 INPP5JQ15735 1006 aaPredicted RBP6.71□□□□□ -1.34
RIF1-201ENST00000243326 Q5PR19 223 aa6.71□□□□□ -1.34
RIF1-201ENST00000243326 C17orf51A8MQB3 221 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 EN2P19622 333 aaPredicted RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 CEBPEQ15744 281 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TMEM52BQ4KMG9 183 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TRAV1-2A0A0B4J238 106 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 OR4C46A6NHA9 309 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TNFSF4P23510 183 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 PHYHIPLQ96FC7 376 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 OR5AL1P0C617 328 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 HINT1P49773 126 aaPredicted RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 PIGYQ3MUY2 71 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TNFRSF19Q9NS68 423 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 LHX6Q9UPM6 363 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 SIGLEC7Q9Y286 467 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 COL22A1Q8NFW1 1626 aaPredicted RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 ZNF98A6NK75 572 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 GRINAQ7Z429 371 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 MRM2Q9UI43 246 aaKnown RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 TMEM218A2RU14 115 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 IGHA2P01877 340 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CHRNB4P30926 498 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 OR10X1Q8NGY0 326 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 OR4C3Q8NH37 302 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 SLC35B3Q9H1N7 401 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 KCNIP2Q9NS61 270 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ZNF92Q03936 586 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TMEM241Q24JQ0 296 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 FLYWCH2Q96CP2 140 aaKnown RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 TAAR9Q96RI9 348 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 DECR2Q9NUI1 292 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 LPAR6P43657 344 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ACOT6Q3I5F7 207 aaPredicted RBP6.7□□□□□ -1.34
RIF1-201ENST00000243326 LYZL2Q7Z4W2 148 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 NOXO1Q8NFA2 376 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 IGLV3-25P01717 112 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 TRAT1Q6PIZ9 186 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 OR5AC2Q9NZP5 309 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 WNT16Q9UBV4 365 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 H3BVH4 76 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 ACTL6AO96019 429 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 CTLA4P16410 223 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 COTL1Q14019 142 aa6.7□□□□□ -1.34
RIF1-201ENST00000243326 LINC01555Q8NAE3 123 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms