RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 BORCS8Q96FH0 119 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 REEP6Q96HR9 211 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 URM1Q9BTM9 101 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 COMMD9Q9P000 198 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 FLVCR1Q9Y5Y0 555 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 CSMD2Q7Z408 3487 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 CIB4A0PJX0 185 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 I3L521 148 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 VAMP5O95183 116 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 OR4E1P0C645 316 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 NR2C1P13056 603 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 MGMTP16455 207 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 CD34P28906 385 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 B3GALT5-AS1P59052 145 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ARF1P84077 181 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 TFF3Q07654 80 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PLCXD3Q63HM9 321 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 DEGS2Q6QHC5 323 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 DOK3Q7L591 496 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 OR5AS1Q8N127 324 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PAQR4Q8N4S7 273 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 C12orf45Q8N5I9 185 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 STEAP2Q8NFT2 490 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 OR10R2Q8NGX6 335 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 SFXN3Q9BWM7 321 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF581Q9P0T4 197 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 KCNN3Q9UGI6 736 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 NDRG3Q9UGV2 375 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PROCRQ9UNN8 238 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 A0A1W2PNV4 684 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 CTDSPLO15194 276 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PMS2P2O95744 297 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 CFDP00746 253 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 GRB2P62993 217 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ENDOGQ14249 297 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 TSC22D1Q15714 1073 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 NDUFA5Q16718 116 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 LURAP1LQ8IV03 231 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 NKAIN3Q8N8D7 197 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 ST8SIA4Q92187 359 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 SLC25A28Q96A46 364 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 FOXRED1Q96CU9 486 aaPredicted RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 SLA2Q9H6Q3 261 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
VPS4B-201ENST00000238497 PARPBPQ9NWS1 579 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 EHFQ9NZC4 300 aa7.49□□□□□ -1.21
VPS4B-201ENST00000238497 A0A087WZY1 265 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 IGKV1-9A0A0C4DH69 117 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF850A8MQ14 1090 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 F5H5P2 479 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 LINC01387J3KSC0 135 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 MTRF1O75570 445 aaKnown RBP7.48□□□□□ -1.21
VPS4B-201ENST00000238497 OR7C1O76099 320 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SFTPBP07988 381 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 HOXB5P09067 269 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 PTGFRP43088 359 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ARPC4P59998 168 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 HLXQ14774 488 aaPredicted RBP7.48□□□□□ -1.21
VPS4B-201ENST00000238497 CHRFAM7AQ494W8 412 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 PABPC1L2AQ5JQF8 200 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 FDX2Q6P4F2 183 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SKA3Q8IX90 412 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ADAD2Q8NCV1 583 aaKnown RBP7.48□□□□□ -1.21
VPS4B-201ENST00000238497 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 OR5T2Q8NGG2 359 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 KCNG3Q8TAE7 436 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 GPX8Q8TED1 209 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 FAAP24Q9BTP7 215 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 CST11Q9H112 138 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SULT1A3P0DMM9 295 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SULT1A4P0DMN0 295 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ACKR3P25106 362 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 H2BFSP57053 126 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 PSG4Q00888 419 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF680Q8NEM1 530 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SEMA6DQ8NFY4 1073 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 OR5H2Q8NGV7 314 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 SGK3Q96BR1 496 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 LYZL4Q96KX0 146 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF224Q9NZL3 707 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 CLCF1Q9UBD9 225 aa7.48□□□□□ -1.21
VPS4B-201ENST00000238497 MEIKINA0A087WXM9 373 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 CDC14BO60729 498 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 NFYAP23511 347 aaPredicted RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 RBMXP38159 391 aaKnown RBP7.47□□□□□ -1.21
VPS4B-201ENST00000238497 OPCMLQ14982 345 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 SLC25A53Q5H9E4 307 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 PRR18Q8N4B5 295 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 ZNF610Q8N9Z0 462 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 OR1F12Q8NHA8 337 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 RPS4Y2Q8TD47 263 aa7.47□□□□□ -1.21
VPS4B-201ENST00000238497 CCDC107Q8WV48 283 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms