RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF117Q03924 483 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 PRDX1Q06830 199 aaKnown RBP11.48□□□□□ -0.57
VAMP4-201ENST00000236192 RFLNAQ6ZTI6 216 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 FGF13Q92913 245 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 SPTSSAQ969W0 71 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
VAMP4-201ENST00000236192 A0A1W2PN81 502 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 FAM221AA4D161 298 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 HSD17B6O14756 317 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 CTSEP14091 401 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 TPGS2Q68CL5 300 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 IGSF21Q96ID5 467 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 MTCH1Q9NZJ7 389 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 ABHD17CQ6PCB6 329 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 DHRS13Q6UX07 377 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 MTIF3Q9H2K0 278 aaKnown RBP11.47□□□□□ -0.57
VAMP4-201ENST00000236192 A0A1B0GTH9 108 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 CXCL1P09341 107 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 OR1D4P47884 311 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 RAC1P63000 192 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 SNAI3Q3KNW1 292 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 PLAC9Q5JTB6 97 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 PTX4Q96A99 478 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
VAMP4-201ENST00000236192 DIRC2Q96SL1 478 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 NUP205Q92621 2012 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 TEX50A0A1B0GTY4 177 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 MSGN1A6NI15 193 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
VAMP4-201ENST00000236192 CD70P32970 193 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 PRRX1P54821 245 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
VAMP4-201ENST00000236192 TRA2AQ13595 282 aaKnown RBP eCLIP11.46□□□□□ -0.57
VAMP4-201ENST00000236192 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 DDIT4LQ96D03 193 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 EGLN1Q9GZT9 426 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 TRAV36DV7A0A075B6V5 113 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 F5H5K5 113 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 GPR75O95800 540 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 PNLIPP16233 465 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 RPL27P61353 136 aaKnown RBP11.46□□□□□ -0.57
VAMP4-201ENST00000236192 MED25Q71SY5 747 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 OR9A4Q8NGU2 314 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 OR52N5Q8NH56 324 aa11.46□□□□□ -0.57
VAMP4-201ENST00000236192 MRPS2Q9Y399 296 aaKnown RBP11.46□□□□□ -0.57
VAMP4-201ENST00000236192 A0A1W2PR48 441 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 ARPC3O15145 178 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 GNG7O60262 68 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 CCR2P41597 374 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 GABRA6Q16445 453 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 NPSR1Q6W5P4 371 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 RTL10Q7L3V2 364 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 OR2Y1Q8NGV0 311 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 OR5B3Q8NH48 314 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 ZNF385AQ96PM9 386 aaKnown RBP11.46□□□□□ -0.58
VAMP4-201ENST00000236192 WDR61Q9GZS3 305 aaKnown RBP11.46□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM202A6NGA9 273 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 PMP22Q01453 160 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 GGTLC2Q14390 218 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 DOK3Q7L591 496 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 LILRA3Q8N6C8 439 aaPredicted RBP11.46□□□□□ -0.58
VAMP4-201ENST00000236192 TMEM251Q8N6I4 163 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 ARHGAP5-AS1Q96IT6 56 aa11.46□□□□□ -0.58
VAMP4-201ENST00000236192 UMODP07911 640 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 HOXB9P17482 250 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 POC1AQ8NBT0 407 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 RNASEH2CQ8TDP1 164 aaKnown RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 GPR132Q9UNW8 380 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 COA3Q9Y2R0 106 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 C17orf105B2RV13 164 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 NPIPB7O75200 414 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 SELENOTP62341 195 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 P2RY6Q15077 328 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 EID2BQ96D98 161 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 RAB40CQ96S21 281 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 MENTQ9BUN1 341 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 RGPD5Q99666 1765 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 OR4C45A6NMZ5 311 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 GPM6BQ13491 265 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 Q56UQ5 140 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 MRPL30Q8TCC3 161 aaKnown RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 ARRDC3Q96B67 414 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 DMRTA2Q96SC8 542 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 NXF5Q9H1B4 397 aaKnown RBP11.45□□□□□ -0.58
VAMP4-201ENST00000236192 A0A087WUJ7 227 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 SOD2P04179 222 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 IAPPP10997 89 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 ZNF17P17021 662 aa11.45□□□□□ -0.58
VAMP4-201ENST00000236192 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms