RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GNB1P62873 340 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ACOT6Q3I5F7 207 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 AARDQ4LEZ3 155 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ZBTB37Q5TC79 503 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 PXDC1Q5TGL8 231 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 B3GNTL1Q67FW5 361 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 HIST2H3AQ71DI3 136 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 C6orf201Q7Z4U5 140 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ZNF485Q8NCK3 441 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ERGIC1Q969X5 290 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 GPA33Q99795 319 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 MARVELD1Q9BSK0 173 aa10.23□□□□□ -0.77
NOD1-201ENST00000222823 ZNF230Q9UIE0 474 aaPredicted RBP10.23□□□□□ -0.77
NOD1-201ENST00000222823 SPTBN1Q01082 2364 aaKnown RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 A0A1B0GTQ1 180 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 NGFP01138 241 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 PMP22Q01453 160 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ENDOGQ14249 297 aaKnown RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 ST3GAL2Q16842 350 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 TIGITQ495A1 244 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ZNF787Q6DD87 383 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 OR2Z1Q8NG97 314 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 OR13G1Q8NGZ3 307 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 SLC39A7Q92504 469 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 OR4F4Q96R69 305 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 PRRX2Q99811 253 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 GINS3Q9BRX5 216 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 CNTD2Q9H8S5 307 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 CACFD1Q9UGQ2 172 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 TRIM77I1YAP6 450 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 TRAF3IP2O43734 574 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 IGHA1P01876 353 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 DTYMKP23919 212 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ALKBH6Q3KRA9 238 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 MUC20Q8N307 709 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 RFESDQ8TAC1 157 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 RXFP4Q8TDU9 374 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 TVP23CQ96ET8 276 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 MIXL1Q9H2W2 232 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 CES1P1Q9UKY3 287 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ICAM5Q9UMF0 924 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 GPR37O15354 613 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 OGG1O15527 345 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 PDCD6O75340 191 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 ZNF816Q0VGE8 651 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 MESTQ5EB52 335 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 ERRFI1Q9UJM3 462 aaPredicted RBP10.22□□□□□ -0.77
NOD1-201ENST00000222823 TCFL5Q9UL49 500 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 U3KQ87 197 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
NOD1-201ENST00000222823 SSTP61278 116 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 PPP1R1AQ13522 171 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 TRIP6Q15654 476 aaKnown RBP10.21□□□□□ -0.77
NOD1-201ENST00000222823 ZNF79Q15937 498 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 GAB4Q2WGN9 574 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 HES3Q5TGS1 186 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 ADGRG3Q86Y34 549 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 NCOR1O75376 2440 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 ZNF83P51522 516 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 ARL16Q0P5N6 197 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 MICBQ29980 383 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 CLDN23Q96B33 292 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 TMED3Q9Y3Q3 217 aa10.21□□□□□ -0.77
NOD1-201ENST00000222823 IGKV1-8A0A0C4DH67 115 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 TCRBV16S1A1N1A0A5B0 115 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 TUBAL3A6NHL2 446 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 LIPT2A6NK58 231 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 DLL1O00548 723 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SULT1A3P0DMM9 295 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SULT1A4P0DMN0 295 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 CT45A10P0DMU9 189 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 BMP5P22003 454 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 DEFA6Q01524 100 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 ISXQ2M1V0 245 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SFTPA2Q8IWL1 248 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 PTPMT1Q8WUK0 201 aaPredicted RBP10.21□□□□□ -0.78
NOD1-201ENST00000222823 ADGRG7Q96K78 797 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SMIM7Q9BQ49 75 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SOX7Q9BT81 388 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 FN3KRPQ9HA64 309 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 MTCH1Q9NZJ7 389 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 CLEC1BQ9P126 229 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 M0R1X1 148 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 FOXS1O43638 330 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 OR3A4PP47883 348 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SPINK14Q6IE38 97 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 Q7L0L9 218 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 SLC36A1Q7Z2H8 476 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 TMEM52Q8NDY8 209 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 NMES1Q9C002 83 aa10.21□□□□□ -0.78
NOD1-201ENST00000222823 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.78
NOD1-201ENST00000222823 LYZL6O75951 148 aa10.2□□□□□ -0.78
NOD1-201ENST00000222823 RRASP10301 218 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms