RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 OPRM1P35372 400 aa15.06■□□□□ 0
USB1-201ENST00000219281 ZNF133P52736 654 aaPredicted RBP15.06■□□□□ 0
USB1-201ENST00000219281 DVL1P1P54792 670 aaPredicted RBP15.06■□□□□ 0
USB1-201ENST00000219281 HIST1H3AP68431 136 aa15.06■□□□□ 0
USB1-201ENST00000219281 TAF9Q16594 264 aa15.06■□□□□ 0
USB1-201ENST00000219281 SWI5Q1ZZU3 235 aa15.06■□□□□ 0
USB1-201ENST00000219281 HIST2H3PS2Q5TEC6 136 aa15.06■□□□□ 0
USB1-201ENST00000219281 OPN5Q6U736 354 aa15.06■□□□□ 0
USB1-201ENST00000219281 ETV3LQ6ZN32 361 aa15.06■□□□□ 0
USB1-201ENST00000219281 HIST2H3AQ71DI3 136 aa15.06■□□□□ 0
USB1-201ENST00000219281 TOMM40LQ969M1 308 aa15.06■□□□□ 0
USB1-201ENST00000219281 OCIAD1Q9NX40 245 aa15.06■□□□□ 0
USB1-201ENST00000219281 AK3Q9UIJ7 227 aa15.06■□□□□ 0
USB1-201ENST00000219281 NCOA6Q14686 2063 aaPredicted RBP15.06■□□□□ 0
USB1-201ENST00000219281 TNRC6BQ9UPQ9 1833 aaKnown RBP15.05■□□□□ 0
USB1-201ENST00000219281 FAM157AC9JC47 383 aa15.05■□□□□ 0
USB1-201ENST00000219281 OTX1P32242 354 aaPredicted RBP15.05■□□□□ 0
USB1-201ENST00000219281 PIGPP57054 158 aa15.05■□□□□ 0
USB1-201ENST00000219281 DMBX1Q8NFW5 382 aa15.05■□□□□ 0
USB1-201ENST00000219281 OR2AE1Q8NHA4 323 aa15.05■□□□□ 0
USB1-201ENST00000219281 ERGIC1Q969X5 290 aa15.05■□□□□ 0
USB1-201ENST00000219281 FBXO17Q96EF6 278 aa15.05■□□□□ 0
USB1-201ENST00000219281 ZNF837Q96EG3 531 aaPredicted RBP15.05■□□□□ 0
USB1-201ENST00000219281 BSCL2Q96G97 398 aaPredicted RBP15.05■□□□□ 0
USB1-201ENST00000219281 GNRHR2Q96P88 292 aa15.05■□□□□ 0
USB1-201ENST00000219281 METTL9Q9H1A3 318 aa15.05■□□□□ 0
USB1-201ENST00000219281 FAM230AA0A1W2PPH8 454 aa15.05■□□□□ -0
USB1-201ENST00000219281 COLCA2A8K830 154 aa15.05■□□□□ -0
USB1-201ENST00000219281 ZNF850A8MQ14 1090 aa15.05■□□□□ -0
USB1-201ENST00000219281 CFIP05156 583 aa15.05■□□□□ -0
USB1-201ENST00000219281 ACKR3P25106 362 aa15.05■□□□□ -0
USB1-201ENST00000219281 PRSS12P56730 875 aa15.05■□□□□ -0
USB1-201ENST00000219281 RAET1LQ5VY80 246 aa15.05■□□□□ -0
USB1-201ENST00000219281 Q6ZSR3 168 aa15.05■□□□□ -0
USB1-201ENST00000219281 FOXL2NBQ6ZUU3 175 aa15.05■□□□□ -0
USB1-201ENST00000219281 SKA3Q8IX90 412 aa15.05■□□□□ -0
USB1-201ENST00000219281 TMEM123Q8N131 208 aa15.05■□□□□ -0
USB1-201ENST00000219281 SPTSSAQ969W0 71 aa15.05■□□□□ -0
USB1-201ENST00000219281 ZDBF2Q9HCK1 2354 aa15.04■□□□□ -0
USB1-201ENST00000219281 G3V3Y1 287 aa15.04■□□□□ -0
USB1-201ENST00000219281 ONECUT2O95948 504 aa15.04■□□□□ -0
USB1-201ENST00000219281 AKR1C3P42330 323 aa15.04■□□□□ -0
USB1-201ENST00000219281 FAM3AP98173 230 aa15.04■□□□□ -0
USB1-201ENST00000219281 RSU1Q15404 277 aa15.04■□□□□ -0
USB1-201ENST00000219281 PLXDC2Q6UX71 529 aa15.04■□□□□ -0
USB1-201ENST00000219281 C20orf196Q8IYI0 205 aa15.04■□□□□ -0
USB1-201ENST00000219281 OR9K2Q8NGE7 335 aa15.04■□□□□ -0
USB1-201ENST00000219281 SECTM1Q8WVN6 248 aa15.04■□□□□ -0
USB1-201ENST00000219281 C10orf35Q96D05 121 aa15.04■□□□□ -0
USB1-201ENST00000219281 JSRP1Q96MG2 331 aaPredicted RBP15.04■□□□□ -0
USB1-201ENST00000219281 ULBP2Q9BZM5 246 aa15.04■□□□□ -0
USB1-201ENST00000219281 DECR2Q9NUI1 292 aa15.04■□□□□ -0
USB1-201ENST00000219281 RTTNQ86VV8 2226 aa15.04■□□□□ -0
USB1-201ENST00000219281 PQLC2LA1A4F0 135 aa15.04■□□□□ -0
USB1-201ENST00000219281 MBPP02686 304 aaPredicted RBP15.04■□□□□ -0
USB1-201ENST00000219281 BRICD5Q6PL45 260 aa15.04■□□□□ -0
USB1-201ENST00000219281 PPP1R3BQ86XI6 285 aa15.04■□□□□ -0
USB1-201ENST00000219281 DYRK2Q92630 601 aa15.04■□□□□ -0
USB1-201ENST00000219281 NECAP2Q9NVZ3 263 aa15.04■□□□□ -0
USB1-201ENST00000219281 CACFD1Q9UGQ2 172 aa15.04■□□□□ -0
USB1-201ENST00000219281 EDARQ9UNE0 448 aa15.04■□□□□ -0
USB1-201ENST00000219281 KCNIP3Q9Y2W7 256 aa15.04■□□□□ -0
USB1-201ENST00000219281 OR5AC1P0C628 307 aa15.03■□□□□ -0
USB1-201ENST00000219281 ZNF728P0DKX0 622 aa15.03■□□□□ -0
USB1-201ENST00000219281 PPT1P50897 306 aa15.03■□□□□ -0
USB1-201ENST00000219281 FXYD4P59646 89 aa15.03■□□□□ -0
USB1-201ENST00000219281 TSPO2Q5TGU0 170 aa15.03■□□□□ -0
USB1-201ENST00000219281 PLEKHA2Q9HB19 425 aa15.03■□□□□ -0
USB1-201ENST00000219281 SMCO4Q9NRQ5 59 aa15.03■□□□□ -0
USB1-201ENST00000219281 NXT1Q9UKK6 140 aaKnown RBP15.03■□□□□ -0
USB1-201ENST00000219281 POMT1Q9Y6A1 747 aa15.03■□□□□ -0
USB1-201ENST00000219281 ARID1AO14497 2285 aa15.03■□□□□ -0
USB1-201ENST00000219281 IGKV1-27A0A075B6S5 117 aa15.03■□□□□ -0
USB1-201ENST00000219281 A0A087WZY1 265 aa15.03■□□□□ -0
USB1-201ENST00000219281 EIF1BO60739 113 aaKnown RBP15.03■□□□□ -0
USB1-201ENST00000219281 APOC1P02654 83 aa15.03■□□□□ -0
USB1-201ENST00000219281 GLI4P10075 376 aa15.03■□□□□ -0
USB1-201ENST00000219281 CCL3P10147 92 aa15.03■□□□□ -0
USB1-201ENST00000219281 TMEM187Q14656 261 aa15.03■□□□□ -0
USB1-201ENST00000219281 PCOLCEQ15113 449 aa15.03■□□□□ -0
USB1-201ENST00000219281 ABCA11PQ4W5N1 156 aa15.03■□□□□ -0
USB1-201ENST00000219281 UBAC2Q8NBM4 344 aa15.03■□□□□ -0
USB1-201ENST00000219281 NAXEQ8NCW5 288 aa15.03■□□□□ -0
USB1-201ENST00000219281 LYPD6BQ8NI32 183 aa15.03■□□□□ -0
USB1-201ENST00000219281 IFI44Q8TCB0 444 aa15.03■□□□□ -0
USB1-201ENST00000219281 CLCC1Q96S66 551 aa15.03■□□□□ -0
USB1-201ENST00000219281 NAA11Q9BSU3 229 aaPredicted RBP15.03■□□□□ -0
USB1-201ENST00000219281 NAA60Q9H7X0 242 aa15.03■□□□□ -0
USB1-201ENST00000219281 MYO7BQ6PIF6 2116 aa15.02■□□□□ -0
USB1-201ENST00000219281 FAM221AA4D161 298 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 NME2P1O60361 137 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 DIRAS3O95661 229 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 TSPAN15O95858 294 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 CTAG1AP78358 180 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 ZXDAP98168 799 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 MRPL14Q6P1L8 145 aaKnown RBP15.02□□□□□ -0.01
USB1-201ENST00000219281 LYZL2Q7Z4W2 148 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 ZIC4Q8N9L1 334 aa15.02□□□□□ -0.01
USB1-201ENST00000219281 RTN4IP1Q8WWV3 396 aaPredicted RBP15.02□□□□□ -0.01
USB1-201ENST00000219281 NAT6Q93015 286 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms