RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 GGNBP1Q5YKI7 109 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 NLGN4XQ8N0W4 816 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 DNAJA3Q96EY1 480 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ZMAT3Q9HA38 289 aaKnown RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 SEBOXQ9HB31 216 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ASCC3Q8N3C0 2202 aaKnown RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 POLEQ07864 2286 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 KIAA1549LQ6ZVL6 1849 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 C5orf49A4QMS7 147 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PLPP3O14495 311 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HS3ST1O14792 307 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ADAM11O75078 769 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HAND1O96004 215 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 CRHP06850 196 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PPP1R1AQ13522 171 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 VAX1Q5SQQ9 334 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ASCL5Q7RTU5 278 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 UBAC2Q8NBM4 344 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 VSTM2AQ8TAG5 236 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 CMBLQ96DG6 245 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 CALHM2Q9HA72 323 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FGF22Q9HCT0 170 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 CES1P1Q9UKY3 287 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 MMP24Q9Y5R2 645 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 MTCH2Q9Y6C9 303 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 UBE2L5PA0A1B0GUS4 154 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PRICKLE3O43900 615 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 PRKRAO75569 313 aaKnown RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 CNIH1O95406 144 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PNLIPP16233 465 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GLRA1P23415 457 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 MYBPHQ13203 477 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ERV3-1Q14264 604 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 SLC35E3Q7Z769 313 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR2C3Q8N628 320 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR13H1Q8NG92 308 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR4D9Q8NGE8 314 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 LILRB1Q8NHL6 650 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 FOXN4Q96NZ1 517 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 C20orf24Q9BUV8 137 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TGIF2Q9GZN2 237 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GAL3ST2Q9H3Q3 398 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 SIRT3Q9NTG7 399 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 CCSO14618 274 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ZNF737O75373 536 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FFAR4Q5NUL3 377 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 H1FOOQ8IZA3 346 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 C2CD4CQ8TF44 421 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 DIRC2Q96SL1 478 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 MAGT1Q9H0U3 335 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 PROCRQ9UNN8 238 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FLVCR2Q9UPI3 526 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 THADAQ6YHU6 1953 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 A0A0U1RQS6 177 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 A0A0U1RQV5 110 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 A0A1W2PPC4 97 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A18PA6NE21 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A16PA6NEW6 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A20PA6NIJ5 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 NPIPB13A6NJU9 1138 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A7PA6NKC0 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TMEM210A6NLX4 147 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A22PA8MWA6 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A12PA8MX19 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A5PA8MXJ8 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A23PA8MXZ1 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 NPIPB4C9JG80 1138 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HRO43593 1189 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 MPDU1O75352 247 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 IGFBP1P08833 259 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A15PP0C7V4 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A14PP0C7W9 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GABRA1P14867 456 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HAAOP46952 286 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 LGALS4P56470 323 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TMEM30BQ3MIR4 351 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 WDR38Q5JTN6 314 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ZNF770Q6IQ21 691 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 MRGPRGQ86SM5 289 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TMEM130Q8N3G9 435 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 TP53I13Q8NBR0 393 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR8G5Q8NG78 346 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 GINS3Q9BRX5 216 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ADAT1Q9BUB4 502 aaKnown RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 PTDSS2Q9BVG9 487 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 BET1LQ9NYM9 111 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 VAX2Q9UIW0 290 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 ZNF320A2RRD8 509 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 A6NDN8 102 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 OR7C2O60412 319 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 HOXA6P31267 233 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 SLC38A11Q08AI6 406 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 VMA21Q3ZAQ7 101 aa3.94□□□□□ -1.78
CHD9-201ENST00000219084 BCL2L2Q92843 193 aaPredicted RBP3.94□□□□□ -1.78
CHD9-201ENST00000219084 PERPQ96FX8 193 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms