RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DNAJC8O75937 253 aaPredicted RBP12.88□□□□□ -0.35
ERCC1-201ENST00000013807 TK1P04183 234 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 DLX6P56179 175 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
ERCC1-201ENST00000013807 MRM2Q9UI43 246 aaKnown RBP12.88□□□□□ -0.35
ERCC1-201ENST00000013807 CSF1P09603 554 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 EPHA2P29317 976 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 BCL2L15Q5TBC7 163 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 Q8N2B8 174 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 CCDC54Q8NEL0 328 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 RORBQ92753 470 aa12.87□□□□□ -0.35
ERCC1-201ENST00000013807 H2AFY2Q9P0M6 372 aaPredicted RBP12.87□□□□□ -0.35
ERCC1-201ENST00000013807 ZNF670-ZNF695F2Z2N8 137 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 ZNF737O75373 536 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 NXPH2O95156 264 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 CAPZA1P52907 286 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 ZNF273Q14593 569 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 ATP6AP1Q15904 470 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 KPRPQ5T749 579 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-201ENST00000013807 Q6ZTK2 550 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 BCDIN3DQ7Z5W3 292 aaKnown RBP12.86□□□□□ -0.35
ERCC1-201ENST00000013807 GID4Q8IVV7 300 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 OR2T6Q8NHC8 308 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 NPFFR1Q9GZQ6 430 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 KRT84Q9NSB2 600 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 WARS2Q9UGM6 360 aaKnown RBP12.86□□□□□ -0.35
ERCC1-201ENST00000013807 ENOPH1Q9UHY7 261 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.86□□□□□ -0.35
ERCC1-201ENST00000013807 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
ERCC1-201ENST00000013807 TBL2Q9Y4P3 447 aaKnown RBP12.86□□□□□ -0.35
ERCC1-201ENST00000013807 ODF3BA8MYP8 253 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 G3V2T6 193 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
ERCC1-201ENST00000013807 CHST1O43916 411 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 SULT1C4O75897 302 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 OPN1MWP04001 364 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 CCL3L1P16619 93 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
ERCC1-201ENST00000013807 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 CATSPERDQ86XM0 798 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
ERCC1-201ENST00000013807 C10orf35Q96D05 121 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 MALSU1Q96EH3 234 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 CADM1Q9BY67 442 aaKnown RBP12.85□□□□□ -0.35
ERCC1-201ENST00000013807 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 MTCH1Q9NZJ7 389 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 SIGLEC9Q9Y336 463 aa12.85□□□□□ -0.35
ERCC1-201ENST00000013807 MITFO75030 526 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-201ENST00000013807 CHRM2P08172 466 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 DYNLT3P51808 116 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 BMXP51813 675 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 LGALS4P56470 323 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-201ENST00000013807 TMED1Q13445 227 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 LY6EQ16553 131 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 ZNF626Q68DY1 528 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 ANGPTL5Q86XS5 388 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 WIPF2Q8TF74 440 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-201ENST00000013807 SLC7A11Q9UPY5 501 aa12.84□□□□□ -0.35
ERCC1-201ENST00000013807 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 KRT8P05787 483 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 HTR1FP30939 366 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 FUT6P51993 359 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 ISL1P61371 349 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 COL10A1Q03692 680 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 LHFPL4Q7Z7J7 247 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 DYNAPQ8N1N2 210 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 OR13D1Q8NGV5 346 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-201ENST00000013807 SNX22Q96L94 193 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 CEP19Q96LK0 163 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 IL4I1Q96RQ9 567 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 CHST5Q9GZS9 411 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 FAM53CQ9NYF3 392 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.36
ERCC1-201ENST00000013807 TCF19Q9Y242 345 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms