RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ANXA10Q9UJ72 324 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 TUBD1Q9UJT1 453 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 CTSDP07339 412 aaPredicted RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 CELA2AP08217 269 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 FOLR2P14207 255 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 PPP1CCP36873 323 aaKnown RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 GRB2P62993 217 aaKnown RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 FAM3AP98173 230 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 RARRES2Q99969 163 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 ABHD14AQ9BUJ0 271 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 FAM212BQ9NTI7 297 aaPredicted RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 MYOTQ9UBF9 498 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 GHRLQ9UBU3 117 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 EXPH5Q8NEV8 1989 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 DHRS3O75911 302 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 PATE4P0C8F1 98 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 ZNF84P51523 738 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 HIST3H3Q16695 136 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 RTN4IP1Q8WWV3 396 aaPredicted RBP12.24□□□□□ -0.45
USH1C-201ENST00000005226 HAS2Q92819 552 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 OR6C1Q96RD1 312 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 GPHA2Q96T91 129 aa12.24□□□□□ -0.45
USH1C-201ENST00000005226 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 ZNHIT1O43257 154 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 GAPDHP04406 335 aaKnown RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 NXPH1P58417 271 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 ZNF574Q6ZN55 896 aaPredicted RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 SYT13Q7L8C5 426 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CPEB2Q7Z5Q1 589 aaKnown RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 UBAC2Q8NBM4 344 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 SGK3Q96BR1 496 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 GNRHR2Q96P88 292 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 PLEK2Q9NYT0 353 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 PISDQ9UG56 409 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 IGKV1-27A0A075B6S5 117 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CCDC187A0A096LP49 1063 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 GPR37O15354 613 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 GDF9O60383 454 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 MT-ND4LP03901 98 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 DANCRP0C864 163 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 AGAP20933 346 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 GUCA1AP43080 201 aaPredicted RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 CSNK1A1P48729 337 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CEBPGP53567 150 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CCL20P78556 96 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 S100A12P80511 92 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 TMEM187Q14656 261 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 PIGYQ3MUY2 71 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 ABCA11PQ4W5N1 156 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 NCMAPQ5T1S8 102 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
USH1C-201ENST00000005226 AKR7LQ8NHP1 331 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CHRDQ9H2X0 955 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 C19orf12Q9NSK7 152 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 CA14Q9ULX7 337 aa12.23□□□□□ -0.45
USH1C-201ENST00000005226 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
USH1C-201ENST00000005226 CCDC163A0A0D9SF12 145 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 UBE2CO00762 179 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 RAB5AP20339 215 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 MSR1P21757 451 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 MEX3BQ6ZN04 569 aaKnown RBP12.22□□□□□ -0.45
USH1C-201ENST00000005226 ZNF561Q8N587 486 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 FAM213BQ8TBF2 198 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 Q96M66 194 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 CHST5Q9GZS9 411 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 V9GYS6 101 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 M0R135 149 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 ATXN7O15265 892 aaPredicted RBP12.22□□□□□ -0.45
USH1C-201ENST00000005226 OMGP23515 440 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 CLINT1Q14677 625 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 RSU1Q15404 277 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 FAM189A2Q15884 450 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 KCNMB1Q16558 191 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 IGSF11Q5DX21 431 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 SLC16A14Q7RTX9 510 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 ZNF799Q96GE5 643 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 MIOXQ9UGB7 285 aa12.22□□□□□ -0.45
USH1C-201ENST00000005226 E5RGE8 158 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 ETV2O00321 342 aaPredicted RBP12.21□□□□□ -0.45
USH1C-201ENST00000005226 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
USH1C-201ENST00000005226 OR8U8P0C7N1 319 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 SULT1A1P50225 295 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 SLC25A53Q5H9E4 307 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 RHBDD2Q6NTF9 364 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 GJC3Q8NFK1 279 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 JSRP1Q96MG2 331 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms