RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mrps23Q8VE22 177 aaKnown RBP18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Nkd2Q8VE28 461 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Dnajc4Q9D844 244 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 SlirpQ9D8T7 112 aaKnown RBP18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Prss8Q9ESD1 342 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Sectm1bQ9JL59 212 aa18.47■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr250E9PV37 331 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Pcyt1aP49586 367 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 RorcP51450 516 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Vax1Q2NKI2 338 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Nr1d2Q60674 576 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Klf3Q60980 344 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Utf1Q6J1H4 339 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1161Q7TR29 321 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr782Q7TRI2 314 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Zer1Q80ZJ6 779 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Pld4Q8BG07 503 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 GnalQ8CGK7 381 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Klf11Q8K1S5 502 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Swsap1Q8VCI7 278 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr272Q8VGA0 319 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Chmp1aQ921W0 196 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 GpnmbQ99P91 574 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Heatr1G3X9B1 2143 aaKnown RBP18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm45736A0A1B0GS18 427 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Morn1A2RTS7 477 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 I0C0044D17RikA6PWL3 169 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 SiglechB7ZMQ6 332 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm5901D3YVJ1 333 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm8024L7N2E0 100 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 P01655 112 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ccl9P51670 122 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Dynlrb1P62627 96 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ikzf2P81183 526 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ear2P97425 156 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 PilrbQ2YFS2 224 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cnep1r1Q3UJ81 125 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ankrd27Q3UMR0 1048 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Tas2r113Q7M711 309 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rnd1Q8BLR7 232 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Exosc6Q8BTW3 273 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cdc42ep2Q8JZX9 214 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1411Q8VFC4 323 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr120Q8VFQ2 330 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1138Q8VFQ9 311 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Il25Q8VHH8 169 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Defb8Q91V82 60 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Ranbp3Q9CT10 491 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 CrtapQ9CYD3 400 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Barx1Q9ER42 254 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gk2Q9WU65 554 aa18.46■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1234A2AVK5 314 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Sh2b3O09039 548 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Smr2O09133 150 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Macrod2Q3UYG8 475 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Tmprss12Q3V0Q7 336 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Prss33Q80WM7 277 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 C330021F23RikQ8C7T0 141 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1392Q8VFA6 311 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1054Q8VGS7 312 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Kiaa2013Q91X21 634 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Thyn1Q91YJ3 226 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gorasp2Q99JX3 451 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm9817Q9D2M0 144 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ccr9Q9WUT7 369 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Pcnx1Q9QYC1 2344 aa18.45■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Gm14443A2ARX0 610 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1107A2AVB8 312 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Hoxb1P17919 297 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ucp2P70406 309 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Asphd1Q2TA57 360 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Hormad2Q5SQP1 306 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Tle1Q62440 770 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 G6pc3Q6NSQ9 346 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Clec7aQ6QLQ4 244 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Adam20Q7M763 760 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1181Q7TR18 311 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Plekha1Q8BUL6 383 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ak6Q8VCP8 172 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr202Q8VGQ3 307 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Pear1Q8VIK5 1034 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Pga5Q9D106 387 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Zfpl1Q9DB43 310 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Dchs1E9PVD3 3291 aa18.44■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ighv1-76A0A0G2JFE9 117 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr110A2RT31 317 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Klri1B2KG20 248 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr329-psM9MMK4 331 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 RhodP97348 210 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 RelbQ04863 558 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Ccdc106Q3ULM0 279 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Nxph2Q61199 261 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 PtafrQ62035 341 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1131Q7TR45 309 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr111Q7TRK1 317 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr493Q8VEW5 314 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 FetubQ9QXC1 388 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1156A2AVC3 323 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1511E9PWU0 318 aa18.43■□□□□ 0.54
Ccdc88a-202ENSMUST00000109477 Olfr1510E9PZZ6 318 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms