RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 KCNJ3P48549 501 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 ZNF84P51523 738 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 AFF3P51826 1226 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 GUSBP11Q6P575 273 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 DEFB126Q9BYW3 111 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 CHST5Q9GZS9 411 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 ZFP57Q9NU63 452 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 PLEKHJ1Q9NW61 149 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 FBXL17Q9UF56 701 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 FREM2Q5SZK8 3169 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 LOC102725191A0A1B0GVB3 256 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 APOC1P02654 83 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 CD5P06127 495 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 PET100P0DJ07 73 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 CSNK1A1P48729 337 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 HOXA1P49639 335 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 GJC3Q8NFK1 279 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 GLYATL2Q8WU03 294 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 GNRHR2Q96P88 292 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 S100A13Q99584 98 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 RBM24Q9BX46 236 aaKnown RBP12.08□□□□□ -0.48
PHGDH-233ENST00000642021 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 ZNF576Q9H609 170 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 C1orf123Q9NWV4 160 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
PHGDH-233ENST00000642021 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 PNLIPP16233 465 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 CPT2P23786 658 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 ACKR3P25106 362 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 FCGR2CP31995 323 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SULT1A2P50226 295 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 TMEM33P57088 247 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SLC35A1P78382 337 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SURF2Q15527 256 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SP6Q3SY56 376 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 NSUN5P2Q63ZY6 315 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 DHRS11Q6UWP2 260 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 STX12Q86Y82 276 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 GPR173Q9NS66 373 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 G3V3Y1 287 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 K7EPK0 472 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 TLX3O43711 291 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 OPRM1P35372 400 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 TAF9Q16594 264 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 BRICD5Q6PL45 260 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SULF2Q8IWU5 870 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 FAM71E2Q8N5Q1 922 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 OR2AE1Q8NHA4 323 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SVIPQ8NHG7 77 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SLC25A43Q8WUT9 341 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 RARRES3Q9UL19 164 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 LSM5Q9Y4Y9 91 aaKnown RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 TAAR5O14804 337 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 SPRY1O43609 319 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 DEDDO75618 318 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 CST4P01036 141 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 GLI4P10075 376 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 GUCA1AP43080 201 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-233ENST00000642021 C20orf196Q8IYI0 205 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 PP6455Q8WZ26 134 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 DNASE2BQ8WZ79 361 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 DYRK2Q92630 601 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 Q96M66 194 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 PRRX2Q99811 253 aa12.07□□□□□ -0.48
PHGDH-233ENST00000642021 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 COLCA2A8K830 154 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 M0R135 149 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 TMEM225BP0DP42 221 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 ADH6P28332 368 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
PHGDH-233ENST00000642021 AKR1C3P42330 323 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 CCL7P80098 99 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 CHAF1BQ13112 559 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 C10orf128Q5T292 105 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 Q6ZRG5 221 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 FNDC9Q8TBE3 224 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 TMEM54Q969K7 222 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 ZNF799Q96GE5 643 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 PLEK2Q9NYT0 353 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 ANXA10Q9UJ72 324 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 MEMO1Q9Y316 297 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 IGKV1-27A0A075B6S5 117 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 IGHV5-10-1A0A0J9YXX1 117 aa12.06□□□□□ -0.48
PHGDH-233ENST00000642021 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
PHGDH-233ENST00000642021 SCGB1D2O95969 90 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms