RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TMEM104Q8NE00 496 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 SETD6Q8TBK2 473 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-221ENST00000641573 HPSE2Q8WWQ2 592 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 OR5P3Q8WZ94 311 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 DVL3Q92997 716 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-221ENST00000641573 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 CST11Q9H112 138 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 BANF2Q9H503 90 aa11.21□□□□□ -0.61
PHGDH-221ENST00000641573 ELL3Q9HB65 397 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-221ENST00000641573 MRPL15Q9P015 296 aaKnown RBP11.21□□□□□ -0.61
PHGDH-221ENST00000641573 A0A1B0GVG6 124 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 A0A1W2PP11 408 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 FAM90A27PA6NNH2 459 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF732B4DXR9 585 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-221ENST00000641573 LANCL1O43813 399 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ANGPTL7O43827 346 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 PLATP00750 562 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 CRYAAP02489 173 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 THBDP07204 575 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 CD3GP09693 182 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 AGAP20933 346 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 CA6P23280 308 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 GCH1P30793 250 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 MRPS10P82664 201 aaKnown RBP11.2□□□□□ -0.62
PHGDH-221ENST00000641573 PDZK1IP1Q13113 114 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ASAH1Q13510 395 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 OXA1LQ15070 435 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ALKBH6Q3KRA9 238 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF718Q3SXZ3 478 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 HACD4Q5VWC8 232 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF57Q68EA5 555 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-221ENST00000641573 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ASCL4Q6XD76 172 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 Q6ZNX1 250 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 DCDC5Q6ZRR9 648 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 SSX8Q7RTT4 187 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 WFDC8Q8IUA0 241 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 MINDY2Q8NBR6 621 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ACBD4Q8NC06 268 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 OR5A2Q8NGI9 324 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 SMIM4Q8WVI0 70 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 GCDHQ92947 438 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-221ENST00000641573 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ITPKCQ96DU7 683 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 ZC3HAV1LQ96H79 300 aaKnown RBP11.2□□□□□ -0.62
PHGDH-221ENST00000641573 RNF170Q96K19 258 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 LPAR5Q9H1C0 372 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 AUNIPQ9H7T9 357 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 COQ3Q9NZJ6 369 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 SPEF1Q9Y4P9 236 aa11.2□□□□□ -0.62
PHGDH-221ENST00000641573 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 GABARAPH6UMI1 98 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 RAB27BO00194 218 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PLA2G10O15496 165 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 SCGNO76038 276 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 HTR3BO95264 441 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 CLDN14O95500 239 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PTTG1O95997 202 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 CHRM2P08172 466 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PTHLHP12272 177 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PPP3CBP16298 524 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 SERPINA2P20848 420 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 CD40P25942 277 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 VEGFCP49767 419 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 FABP6P51161 128 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 GPM6AP51674 278 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 RPS27AP62979 156 aaKnown RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 SNTB2Q13425 540 aaKnown RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 RSU1Q15404 277 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 MBNL2Q5VZF2 373 aaKnown RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PXT1Q8NFP0 134 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 OR52I2Q8NH67 350 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 LILRB4Q8NHJ6 448 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 FCAMRQ8WWV6 532 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 URM1Q9BTM9 101 aaKnown RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 PURGQ9UJV8 347 aaKnown RBP11.19□□□□□ -0.62
PHGDH-221ENST00000641573 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
PHGDH-221ENST00000641573 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 OR5B21A6NL26 309 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 ATP6V1G2-DDX39BF2Z307 99 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 TIMM8AO60220 97 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 SPNP16150 400 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 MGMTP16455 207 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 KITLGP21583 273 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 GLRXP35754 106 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 GNG3P63215 75 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms