RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MMP23AO75900 390 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ZNF728P0DKX0 622 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 PIPP12273 146 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACKR3P25106 362 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 PRKXP51817 358 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 CAPZA1P52907 286 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACTA2P62736 377 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACTG2P63267 376 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACTC1P68032 377 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACTA1P68133 377 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 VMACQ2NL98 169 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 BAIAP2L2Q6UXY1 529 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ACP7Q6ZNF0 438 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 LINC00471Q8N535 108 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ZNF561Q8N587 486 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 COMMD1Q8N668 190 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 RNF152Q8N8N0 203 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 NDNFQ8TB73 568 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 ZNRF4Q8WWF5 429 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 RASSF5Q8WWW0 418 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 REEP6Q96HR9 211 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 PRRC1Q96M27 445 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 OR8B4Q96RC9 309 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 MICU1Q9BPX6 476 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 SPATA25Q9BR10 227 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 RTL8AQ9BWD3 113 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 PAPOLGQ9BWT3 736 aaKnown RBP6.29□□□□□ -1.4
SCARB2-226ENST00000640916 OR51I2Q9H344 312 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 CCDC167Q9P0B6 97 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 KIAA1456Q9P272 454 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 N6AMT1Q9Y5N5 214 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
SCARB2-226ENST00000640916 OR6C68A6NDL8 312 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A18PA6NE21 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A16PA6NEW6 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A20PA6NIJ5 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A9PA6NNJ1 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 ZNF850A8MQ14 1090 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A12PA8MX19 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A5PA8MXJ8 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 B2RBV5 119 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 M0QZK8 103 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 SLC22A2O15244 555 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 NDUFB2O95178 105 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 TK1P04183 234 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A15PP0C7V4 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A13PP0C7W8 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A14PP0C7W9 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM90A24PP0C7X0 464 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 CNTFRP26992 372 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 PRDX2P32119 198 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
SCARB2-226ENST00000640916 PRDX4Q13162 271 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 HAGHQ16775 308 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 SLC36A3Q495N2 470 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FAM27D1Q5T7N8 215 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 MZT2AQ6P582 158 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 C16orf54Q6UWD8 224 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 MBOAT2Q6ZWT7 520 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 ZDHHC21Q8IVQ6 265 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 RNF113BQ8IZP6 322 aaKnown RBP6.28□□□□□ -1.4
SCARB2-226ENST00000640916 OFCC1Q8IZS5 231 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 STPG2Q8N412 459 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 DRAM1Q8N682 238 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 EIF1ADQ8N9N8 165 aaKnown RBP6.28□□□□□ -1.4
SCARB2-226ENST00000640916 MNS1Q8NEH6 495 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 OR10A6Q8NH74 314 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 STMN2Q93045 179 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 RNF170Q96K19 258 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 C16orf45Q96MC5 204 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-226ENST00000640916 NMNAT3Q96T66 252 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 CGREF1Q99674 301 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 FN3KQ9H479 309 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 BAG5Q9UL15 447 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 MPC1Q9Y5U8 109 aa6.28□□□□□ -1.4
SCARB2-226ENST00000640916 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
SCARB2-226ENST00000640916 SERPINE3A8MV23 424 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 LY6LH3BQJ8 138 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 H3BUI4 141 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 SLC25A17O43808 307 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 CST4P01036 141 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 IGLV1-47P01700 117 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 IGHG2P01859 326 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 HTR1DP28221 377 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 BRS3P32247 399 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 KIAA0141Q14154 515 aaPredicted RBP6.27□□□□□ -1.41
SCARB2-226ENST00000640916 SNAPC1Q16533 368 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 SRSF7Q16629 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCARB2-226ENST00000640916 TEX38Q6PEX7 206 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 DNM1P34Q6PK57 102 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 SMARCD3Q6STE5 483 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 DPY19L2P2Q6ZN68 376 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 KRT74Q7RTS7 529 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 CPLX4Q7Z7G2 160 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF429Q86V71 674 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 C5orf56Q8N8D9 126 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms