RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TNFRSF13CQ96RJ3 184 aa7.43□□□□□ -1.22
NECAP1-227ENST00000640648 SIGLEC11Q96RL6 698 aa7.43□□□□□ -1.22
NECAP1-227ENST00000640648 VSTM5A8MXK1 200 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 CDS2O95674 445 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 PEX11BO96011 259 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 TAS2R45P59539 299 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 C1orf185Q5T7R7 199 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 KMT5CQ86Y97 462 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 OR11G2Q8NGC1 345 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZNRF4Q8WWF5 429 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 AMDHD1Q96NU7 426 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 NKX3-1Q99801 234 aaPredicted RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 TAAR2Q9P1P5 351 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SLC5A6Q9Y289 635 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ADAMTS7Q9UKP4 1686 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZC3H12DA2A288 527 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 K7ESM1 405 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 PNLIPRP2P54317 469 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 UBE2NP61088 152 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SERF2P84101 59 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SNAI3Q3KNW1 292 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SLC16A11Q8NCK7 471 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZNF385AQ96PM9 386 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 FAM103A1Q9BTL3 118 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 APOOQ9BUR5 198 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SEPSECSQ9HD40 501 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 APOBEC3BQ9UH17 382 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SERTAD3Q9UJW9 196 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 VDAC3Q9Y277 283 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 MMP23AO75900 390 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZNF16P17020 682 aaPredicted RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 HLA-GP17693 338 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 P2RY2P41231 377 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 VASPP50552 380 aaPredicted RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 TMEM33P57088 247 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 NSDHLQ15738 373 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 PWWP2BQ6NUJ5 590 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 HEPN1Q6WQI6 88 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SLC39A5Q6ZMH5 540 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZFP62Q8NB50 900 aaPredicted RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 HINT3Q9NQE9 182 aaKnown RBP7.42□□□□□ -1.22
NECAP1-227ENST00000640648 CEP290O15078 2479 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 KIR2DS1A0A191URI9 304 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SLC5A10A0PJK1 596 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 FCN1O00602 326 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 NPIPB7O75200 414 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 TMEM225BP0DP42 221 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 FGF5P12034 268 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 GALNSP34059 522 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 KIR2DS4P43632 304 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 KIR2DS1Q14954 304 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 SLC25A35Q3KQZ1 300 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 TMEM268Q5VZI3 342 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 DHRS11Q6UWP2 260 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 DMBX1Q8NFW5 382 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 OR2I1PQ8NGU4 316 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 RPS4Y2Q8TD47 263 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ARRDC3Q96B67 414 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 PGAM5Q96HS1 289 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 ZNF442Q9H7R0 627 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 NTNG1Q9Y2I2 539 aa7.42□□□□□ -1.22
NECAP1-227ENST00000640648 H3BML4 177 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 HSD17B6O14756 317 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CBR3O75828 277 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 TRAPPC6AO75865 159 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CPMP14384 443 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 SLC6A12P48065 614 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 SNU13P55769 128 aaKnown RBP7.41□□□□□ -1.22
NECAP1-227ENST00000640648 PPP1R1AQ13522 171 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 FER1L6Q2WGJ9 1857 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 ATRAIDQ6UW56 229 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 ROBO4Q8WZ75 1007 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 ZNF764Q96H86 408 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-227ENST00000640648 ADOQ96SZ5 270 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-227ENST00000640648 A0A087WUJ7 227 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 A0A087WUU8 490 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 TRBV5-3A0A0A0MS03 114 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CDC14CA4D256 554 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 TNFRSF10CO14798 259 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
NECAP1-227ENST00000640648 PPOXP50336 477 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 SEC11AP67812 179 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 MLC1Q15049 377 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CST9Q5W186 159 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 TCTN3Q6NUS6 607 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 TMEM123Q8N131 208 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 VN1R17PQ8TDU5 208 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 BLNKQ8WV28 456 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 C20orf144Q9BQM9 153 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 ELOVL3Q9HB03 270 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 CISD1Q9NZ45 108 aaKnown RBP7.41□□□□□ -1.22
NECAP1-227ENST00000640648 FUT9Q9Y231 359 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 C19orf67A6NJJ6 358 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 F8VVB4 439 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 F8VWA3 439 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 DANCRP0C864 163 aa7.41□□□□□ -1.22
NECAP1-227ENST00000640648 F3P13726 295 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms