RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF175Q9Y473 711 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 TTC28Q96AY4 2481 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 NXPH3O95157 252 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 HKR1P10072 659 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 B4GALT1P15291 398 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF708P17019 499 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ACKR3P25106 362 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ADH6P28332 368 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 PIGYQ3MUY2 71 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF774Q6NX45 483 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 RXFP4Q8TDU9 374 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-221ENST00000640341 C12orf57Q99622 126 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
SCARB2-221ENST00000640341 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 AMDHD2Q9Y303 409 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 M0R036 132 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 DHHO43323 396 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
SCARB2-221ENST00000640341 CBX5P45973 191 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 PEA15Q15121 130 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 KMT5CQ86Y97 462 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-221ENST00000640341 NDRG3Q9UGV2 375 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 ARPC4-TTLL3A0A0A6YYG9 625 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 HSPB6O14558 160 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 CFIP05156 583 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 C5orf24Q7Z6I8 188 aa12.76□□□□□ -0.37
SCARB2-221ENST00000640341 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-221ENST00000640341 OR5AC1P0C628 307 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 ENDOGQ14249 297 aaKnown RBP12.75□□□□□ -0.37
SCARB2-221ENST00000640341 EIF5AL1Q6IS14 154 aaKnown RBP12.75□□□□□ -0.37
SCARB2-221ENST00000640341 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 LHFPL1Q86WI0 220 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 C14orf79Q96F83 325 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 AQP10Q96PS8 301 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 LIME1Q9H400 295 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 CRLF2Q9HC73 371 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 MRPS17Q9Y2R5 130 aaKnown RBP12.75□□□□□ -0.37
SCARB2-221ENST00000640341 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 GEMIN2O14893 280 aaKnown RBP12.75□□□□□ -0.37
SCARB2-221ENST00000640341 TRAPPC6AO75865 159 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 RPS2P15880 293 aaKnown RBP12.75□□□□□ -0.37
SCARB2-221ENST00000640341 OMGP23515 440 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 RAB13P51153 203 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 ADAMTS17Q8TE56 1095 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 SHDQ96IW2 340 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 HDGFL3Q9Y3E1 203 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 TSPAN15O95858 294 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 NAAAQ02083 359 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 HAS2Q92819 552 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 BORCS8Q96FH0 119 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 CNTNAP3Q9BZ76 1288 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 TMEM100Q9NV29 134 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 FBLN5Q9UBX5 448 aa12.75□□□□□ -0.37
SCARB2-221ENST00000640341 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 IGLV3-12A0A075B6K2 115 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 RSPO1Q2MKA7 263 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SLC22A25Q6T423 547 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 PRRX2Q99811 253 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 RCC2Q9P258 522 aaKnown RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 CAV2P51636 162 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 F2RL1P55085 397 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 DHRS11Q6UWP2 260 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 PIGCQ92535 297 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 ANXA10Q9UJ72 324 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 KCNIP3Q9Y2W7 256 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF98A6NK75 572 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SGCEO43556 437 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 OR7C1O76099 320 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 HTR5AP47898 357 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 ZNF84P51523 738 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SHBQ15464 509 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 FBXL14Q8N1E6 418 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 CD300LFQ8TDQ1 290 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
SCARB2-221ENST00000640341 SEC11CQ9BY50 192 aa12.74□□□□□ -0.37
SCARB2-221ENST00000640341 METTL9Q9H1A3 318 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms