RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ATP6V1FQ16864 119 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 FBXL19-AS1Q494R0 122 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 HSP90AA4PQ58FG1 418 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 FAM104BQ5XKR9 115 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MED27Q6P2C8 311 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 EPGNQ6UW88 154 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 ORMDL3Q8N138 153 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 ARHGAP18Q8N392 663 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 LINC00469Q8N7U9 141 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 OR13C9Q8NGT0 318 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 OR51A7Q8NH64 312 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 ANP32BQ92688 251 aaKnown RBP1.82□□□□□ -2.12
CCDC7-216ENST00000640058 FAM131CQ96AQ9 280 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 TSNAXQ99598 290 aaKnown RBP1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MAP1LC3CQ9BXW4 147 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 TMEM100Q9NV29 134 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 TNIKQ9UKE5 1360 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF407Q9C0G0 2248 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 AQRO60306 1485 aaKnown RBP eCLIP1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MIA3Q5JRA6 1907 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 GATCO43716 136 aaKnown RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 SCO1O75880 301 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 VAPBO95292 243 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 PTTG1O95997 202 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 MAS1P04201 325 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 P2RY2P41231 377 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 GALR1P47211 349 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 IDH2P48735 452 aaKnown RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 MTPNP58546 118 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 RPL31P62899 125 aaKnown RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 TOMM34Q15785 309 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 CDNFQ49AH0 187 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 KLHL12Q53G59 568 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 SETD3Q86TU7 594 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 FAM58AQ8N1B3 248 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 LINC00337Q8N6G1 96 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 CYB561A3Q8NBI2 242 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF680Q8NEM1 530 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 SLC26A10Q8NG04 563 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 CACNG8Q8WXS5 425 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 CIDECQ96AQ7 238 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 CENPNQ96H22 339 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-216ENST00000640058 C20orf144Q9BQM9 153 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 MARVELD1Q9BSK0 173 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 SND1-IT1Q9HBX3 110 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 IFNKQ9P0W0 207 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 PCNX2A6NKB5 2137 aa1.81□□□□□ -2.12
CCDC7-216ENST00000640058 ANKRD20A5PA0PJZ0 165 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 ISPDA4D126 451 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CEACAM18A8MTB9 384 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 A8MWL6 223 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 M0R1B8 84 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 PRMT5O14744 637 aaPredicted RBP1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CSTAP01040 98 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 IGLV6-57P01721 117 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CD28P10747 220 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 ANP32AP39687 249 aaKnown RBP1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CARD18P57730 90 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 GRB2P62993 217 aaKnown RBP1.8□□□□□ -2.12
CCDC7-216ENST00000640058 BTN1A1Q13410 526 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 WDR43Q15061 677 aaKnown RBP eCLIP1.8□□□□□ -2.12
CCDC7-216ENST00000640058 STK38Q15208 465 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF678Q5SXM1 525 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 FAM27D1Q5T7N8 215 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 HHATQ5VTY9 493 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 SLC25A25Q6KCM7 469 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CASP12Q6UXS9 341 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 BBS7Q8IWZ6 715 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 TMEM159Q96B96 161 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 Q96MT0 163 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 GPR82Q96P67 336 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 SPACA5Q96QH8 159 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 RHOXF2Q9BQY4 288 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 C1orf50Q9BV19 199 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 MS4A8Q9BY19 250 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 TM6SF2Q9BZW4 377 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 LZTFL1Q9NQ48 299 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 IL37Q9NZH6 218 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 CFL2Q9Y281 166 aa1.8□□□□□ -2.12
CCDC7-216ENST00000640058 NPHP4O75161 1426 aaPredicted RBP1.8□□□□□ -2.12
CCDC7-216ENST00000640058 PRAMEF26H0Y7S4 382 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 H7C2Y5 167 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF593O00488 134 aaPredicted RBP1.79□□□□□ -2.12
CCDC7-216ENST00000640058 IGHV1-46P01743 117 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 MPIP34949 423 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 PSMD8P48556 350 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 TGM4P49221 684 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 ATP5J2P56134 94 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 MEF2CQ06413 473 aaPredicted RBP1.79□□□□□ -2.12
CCDC7-216ENST00000640058 TRDNQ13061 729 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 DYNC1I2Q13409 638 aaKnown RBP1.79□□□□□ -2.12
CCDC7-216ENST00000640058 DUPD1Q68J44 220 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 APOBEC3HQ6NTF7 200 aaKnown RBP1.79□□□□□ -2.12
CCDC7-216ENST00000640058 TBPL2Q6SJ96 375 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 CA13Q8N1Q1 262 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 NT5CQ8TCD5 201 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF75CPQ92670 426 aaPredicted RBP1.79□□□□□ -2.12
CCDC7-216ENST00000640058 RNF170Q96K19 258 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 TBL1XR1Q9BZK7 514 aa1.79□□□□□ -2.12
CCDC7-216ENST00000640058 C6orf50Q9HD87 102 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms