RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ONECUT2O95948 504 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAM3AP98173 230 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 TSC22D1Q15714 1073 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 GGNBP1Q5YKI7 109 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF385CQ66K41 422 aaPredicted RBP17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 LYPD6BQ8NI32 183 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 NABP1Q96AH0 204 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 PLEKHA2Q9HB19 425 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 ANXA10Q9UJ72 324 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 RARRES3Q9UL19 164 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 NCOA6Q14686 2063 aaPredicted RBP17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 TP53I11O14683 189 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 GABRR1P24046 479 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 CD80P33681 288 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 TMEM33P57088 247 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 RPUSD3Q6P087 351 aaKnown RBP17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 Q6ZRG5 221 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 PIGQQ9BRB3 760 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 PADI1Q9ULC6 663 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 AMDHD2Q9Y303 409 aa17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 CHCHD2Q9Y6H1 151 aaPredicted RBP17.59■□□□□ 0.41
SYNGAP1-227ENST00000638142 A0A087WZY1 265 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 M0R135 149 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 SMIM6P0DI80 62 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 PTAFRP25105 342 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 RSPO1Q2MKA7 263 aaPredicted RBP17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 DTX1Q86Y01 620 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 UBAC2Q8NBM4 344 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 DNASE2BQ8WZ79 361 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZNF799Q96GE5 643 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 KIRREL1Q96J84 757 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 ZMAT5Q9UDW3 170 aaKnown RBP17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.41
SYNGAP1-227ENST00000638142 S100A8P05109 93 aa17.58■□□□□ 0.4
SYNGAP1-227ENST00000638142 PHYHD1Q5SRE7 291 aa17.58■□□□□ 0.4
SYNGAP1-227ENST00000638142 DHRS11Q6UWP2 260 aa17.58■□□□□ 0.4
SYNGAP1-227ENST00000638142 PLA2G2EQ9NZK7 142 aa17.58■□□□□ 0.4
SYNGAP1-227ENST00000638142 VCANP13611 3396 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 LINC01387J3KSC0 135 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 AGPAT2O15120 278 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 OR5H8P0DN80 308 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 HMGN3Q15651 99 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 PRAMEF20Q5VT98 475 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 PLXDC2Q6UX71 529 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 OR9K2Q8NGE7 335 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 SPTSSAQ969W0 71 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 MRPL24Q96A35 216 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 LSM5Q9Y4Y9 91 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 TIMM10BQ9Y5J6 103 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 KPTNQ9Y664 436 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 CEP192Q8TEP8 1941 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 C9JQL5 133 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 DHHO43323 396 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 EIF1BO60739 113 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 VAMP5O95183 116 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 SNRPEP62304 92 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 RNF212Q495C1 297 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 LURAP1LQ8IV03 231 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 LRRC18Q8N456 261 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 SPSB1Q96BD6 273 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 HDHD3Q9BSH5 251 aaPredicted RBP17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 CACFD1Q9UGQ2 172 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 HSF4Q9ULV5 492 aa17.57■□□□□ 0.4
SYNGAP1-227ENST00000638142 TRIOO75962 3097 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 C5orf52A6NGY3 159 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 C1orf196B1AJZ1 125 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 TMEM225BP0DP42 221 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 RGS19P49795 217 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 METTL9Q9H1A3 318 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 FAM212BQ9NTI7 297 aaPredicted RBP17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 KCNIP3Q9Y2W7 256 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 DTYMKP23919 212 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 TMEM123Q8N131 208 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 C14orf79Q96F83 325 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 ARV1Q9H2C2 271 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 NECAP2Q9NVZ3 263 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 PLEK2Q9NYT0 353 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
SYNGAP1-227ENST00000638142 CABIN1Q9Y6J0 2220 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 E5RGE8 158 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 NPIPA2E9PIF3 369 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 NPIPA3F8WFD2 350 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 CYC1P08574 325 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 OR8U9P0C7N5 309 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 MTCP1P56278 107 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 SHBQ15464 509 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 COMMD1Q8N668 190 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 OR8U1Q8NH10 309 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 ZNF385AQ96PM9 386 aaKnown RBP17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 NSG2Q9Y328 171 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 LAMA1P25391 3075 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 UBE2CO00762 179 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 MSTNO14793 375 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 CD63P08962 238 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 PNLIPP16233 465 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 PIGPP57054 158 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 KDF1Q8NAX2 398 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 HIST1H2BAQ96A08 127 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 GALNT14Q96FL9 552 aa17.55■□□□□ 0.4
SYNGAP1-227ENST00000638142 CLCC1Q96S66 551 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms