RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CCNOP22674 350 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PLCXD3Q63HM9 321 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.65■□□□□ 0.58
CLN6-224ENST00000638076 EMG1Q92979 244 aaKnown RBP18.65■□□□□ 0.58
CLN6-224ENST00000638076 SPSB4Q96A44 273 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 HDHD3Q9BSH5 251 aaPredicted RBP18.65■□□□□ 0.58
CLN6-224ENST00000638076 PPA2Q9H2U2 334 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 SLC7A11Q9UPY5 501 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 OSGIN2Q9Y236 505 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 LIPGQ9Y5X9 500 aa18.65■□□□□ 0.58
CLN6-224ENST00000638076 IGKV1D-8A0A087WSZ0 117 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 ZNF816-ZNF321PA0A0X1KG74 233 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 FUT6P51993 359 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 SLC10A1Q14973 349 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 C11orf87Q6NUJ2 197 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 ALKAL2Q6UX46 152 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 ASCL4Q6XD76 172 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 OVCH2Q7RTZ1 564 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 PEG10Q86TG7 708 aaKnown RBP18.64■□□□□ 0.57
CLN6-224ENST00000638076 COMMD7Q86VX2 200 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 APH1AQ96BI3 265 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 SCGB3A2Q96PL1 93 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 ZNF581Q9P0T4 197 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 ATPIF1Q9UII2 106 aa18.64■□□□□ 0.57
CLN6-224ENST00000638076 IGKV1-12A0A0C4DH73 117 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 DBX1A6NMT0 343 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 ZNHIT1O43257 154 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 IGKV1D-12P01611 117 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 CD46P15529 392 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 ATP1B3P54709 279 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 RPUSD3Q6P087 351 aaKnown RBP18.63■□□□□ 0.57
CLN6-224ENST00000638076 TMEM65Q6PI78 240 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 RTBDNQ9BSG5 229 aaPredicted RBP18.63■□□□□ 0.57
CLN6-224ENST00000638076 FAAP24Q9BTP7 215 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 FREM1Q5H8C1 2179 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 ZNF407Q9C0G0 2248 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 CCL2P13500 99 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 MPGP29372 298 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 P2RX3P56373 397 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 STK11Q15831 433 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 COLCA1Q6ZS62 124 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 ZFP62Q8NB50 900 aaPredicted RBP18.63■□□□□ 0.57
CLN6-224ENST00000638076 RNF122Q9H9V4 155 aa18.63■□□□□ 0.57
CLN6-224ENST00000638076 ZNF503-AS2A6NEH8 195 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 TUBAL3A6NHL2 446 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 EEF1E1-BLOC1S5C9J1V9 151 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 B3GALNT1O75752 331 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 CAMK2BQ13554 666 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 ZSCAN4Q8NAM6 433 aaPredicted RBP18.62■□□□□ 0.57
CLN6-224ENST00000638076 OR6K3Q8NGY3 331 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 DEFB127Q9H1M4 99 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 SLC25A4P12235 298 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 PDZK1IP1Q13113 114 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 RNPS1Q15287 305 aaKnown RBP18.62■□□□□ 0.57
CLN6-224ENST00000638076 CLEC18BQ6UXF7 455 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 MCEMP1Q8IX19 187 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 ACKR4Q9NPB9 350 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 RDH8Q9NYR8 311 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 HSF4Q9ULV5 492 aa18.62■□□□□ 0.57
CLN6-224ENST00000638076 DNAJC13O75165 2243 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 C5orf49A4QMS7 147 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 C5orf51A6NDU8 294 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 SFT2D2O95562 160 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 ACTL6AO96019 429 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 CD79AP11912 226 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 ARG2P78540 354 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 SLC9A3R2Q15599 337 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 PIGYQ3MUY2 71 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 NUFIP2Q7Z417 695 aaKnown RBP18.61■□□□□ 0.57
CLN6-224ENST00000638076 SUMF1Q8NBK3 374 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 LDAHQ9H6V9 325 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 AK3Q9UIJ7 227 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 KIF25Q9UIL4 384 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 TNFSF18Q9UNG2 199 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 C13orf42A0A1B0GVH6 325 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 ZNF850A8MQ14 1090 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 MSTNO14793 375 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 GEMIN2O14893 280 aaKnown RBP18.61■□□□□ 0.57
CLN6-224ENST00000638076 GALR2O43603 387 aaPredicted RBP18.61■□□□□ 0.57
CLN6-224ENST00000638076 RRASP10301 218 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 GLRA1P23415 457 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 TOR2AQ5JU69 321 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 OSR2Q8N2R0 312 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 PXT1Q8NFP0 134 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 SCARB1Q8WTV0 552 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 TECTBQ96PL2 329 aa18.61■□□□□ 0.57
CLN6-224ENST00000638076 A0A0D9SG52 128 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SFTPBP07988 381 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SERPINF1P36955 418 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SUPT4H1P63272 117 aaKnown RBP18.6■□□□□ 0.57
CLN6-224ENST00000638076 ATXN7L3Q14CW9 347 aaPredicted RBP18.6■□□□□ 0.57
CLN6-224ENST00000638076 ZNF660Q6AZW8 331 aaPredicted RBP18.6■□□□□ 0.57
CLN6-224ENST00000638076 RFPL4BQ6ZWI9 263 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SLC51BQ86UW2 128 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 OR51F2Q8NH61 342 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 COQ8AQ8NI60 647 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 SPDEFO95238 335 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 CHATP28329 748 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 ARPC4P59998 168 aa18.6■□□□□ 0.57
CLN6-224ENST00000638076 ZNF766Q5HY98 468 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms