RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CD74P04233 296 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 ZNF735P0CB33 412 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 HRH1P35367 487 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 NPBWR2P48146 333 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 SCGB2B2Q4G0G5 96 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 KRTCAP3Q53RY4 240 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 SIGIRRQ6IA17 410 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 ALKBH2Q6NS38 261 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 ACTR6Q9GZN1 396 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 MED28Q9H204 178 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 ZNF230Q9UIE0 474 aaPredicted RBP18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 SH3BGRL2Q9UJC5 107 aa18.6■□□□□ 0.57
CHRNA7-228ENST00000637519 C3orf80F5H4A9 247 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 CST4P01036 141 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 HAAOP46952 286 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 RAG2P55895 527 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 TMPRSS3P57727 454 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 PPP1CBP62140 327 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ARFRP1Q13795 201 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ZNF474Q6S9Z5 364 aaPredicted RBP18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 IDO2Q6ZQW0 420 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 RP1L1Q8IWN7 2480 aaPredicted RBP18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 BPIFB2Q8N4F0 458 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 HDHD3Q9BSH5 251 aaPredicted RBP18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ZNF732B4DXR9 585 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 RLN1P04808 185 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 CXCL3P19876 107 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 CEACAM21Q3KPI0 293 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ALKBH6Q3KRA9 238 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 BRICD5Q6PL45 260 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ASCL4Q6XD76 172 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 CCDC36Q8IYA8 594 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 FBXL14Q8N1E6 418 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 C1orf162Q8NEQ5 155 aaPredicted RBP18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 CSNK2A3Q8NEV1 391 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 OR52B4Q8NGK2 314 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 DEDD2Q8WXF8 326 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 TECTBQ96PL2 329 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 TINAGQ9UJW2 476 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 ZZEF1O43149 2961 aa18.59■□□□□ 0.57
CHRNA7-228ENST00000637519 GEMIN2O14893 280 aaKnown RBP18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 IGKV3-15P01624 115 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 PMP2P02689 132 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 VSIG10L2P0DP72 767 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 CA6P23280 308 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 SNU13P55769 128 aaKnown RBP18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 ZFP69Q49AA0 526 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 BHLHA15Q7RTS1 189 aaPredicted RBP18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 OR5L1Q8NGL2 311 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 DYRK2Q92630 601 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 FBXW5Q969U6 566 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 SLAMF9Q96A28 289 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 CHST6Q9GZX3 395 aa18.58■□□□□ 0.57
CHRNA7-228ENST00000637519 F8VVB4 439 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 F8VWA3 439 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 CBR1P16152 277 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 RNASE10Q5GAN6 216 aaKnown RBP18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 SLC25A40Q8TBP6 338 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 ST8SIA4Q92187 359 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 SNRNP40Q96DI7 357 aaKnown RBP18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 HS3ST6Q96QI5 342 aa18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 EIF3KQ9UBQ5 218 aaKnown RBP18.58■□□□□ 0.56
CHRNA7-228ENST00000637519 ANKRD30BLA7E2S9 258 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 MSTNO14793 375 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 CECR9P0C854 216 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 SF3B4Q15427 424 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 FAM189A2Q15884 450 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 FTMTQ8N4E7 242 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 PXT1Q8NFP0 134 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 OR1J1Q8NGS3 322 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 CAPSLQ8WWF8 208 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 OPA3Q9H6K4 179 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 NPDC1Q9NQX5 325 aaPredicted RBP18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 ASF1BQ9NVP2 202 aa18.57■□□□□ 0.56
CHRNA7-228ENST00000637519 SSNA1O43805 119 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 GLI4P10075 376 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 BCL3P20749 454 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 UCP2P55851 309 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 MRPL49Q13405 166 aaKnown RBP18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 BEND4Q6ZU67 534 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 DOLPP1Q86YN1 238 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 OSR2Q8N2R0 312 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 OR13C8Q8NGS7 320 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 ST6GALNAC5Q9BVH7 336 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 MOV10Q9HCE1 1003 aaKnown RBP18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 PLEKHJ1Q9NW61 149 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 IGHV3-64DA0A0J9YX35 117 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 A0A1B0GUH1 482 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 PTGER4P35408 488 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 TIMP3P35625 211 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 MPV17P39210 176 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 DAZAP2Q15038 168 aaPredicted RBP18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 PNLIPRP3Q17RR3 467 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 MICBQ29980 383 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 GLDNQ6ZMI3 551 aaPredicted RBP18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 C17orf107Q6ZR85 190 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 OR5P3Q8WZ94 311 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 MRGPRFQ96AM1 343 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 FAAP24Q9BTP7 215 aa18.56■□□□□ 0.56
CHRNA7-228ENST00000637519 IL36RNQ9UBH0 155 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms