RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NDUFB3O43676 98 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 NOS1APO75052 506 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 CRLF1O75462 422 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 ALX3O95076 343 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 NXPH2O95156 264 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 ECDO95905 644 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 GYPAP02724 150 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 LIPFP07098 398 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 ACAA1P09110 424 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 RAB3AP20336 220 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 C21orf33P30042 268 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 GABRA2P47869 451 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 GTF2A1P52655 376 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 GMFBP60983 142 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 BDH1Q02338 343 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 IL24Q13007 206 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 CDK5R1Q15078 307 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 UBE2V2Q15819 145 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 CR1LQ2VPA4 569 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 SMIM21Q3B7S5 101 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 LRRC10Q5BKY1 277 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 FIP1L1Q6UN15 594 aaKnown RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 Q8IYB0 196 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 MS4A15Q8N5U1 240 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 TRMT10AQ8TBZ6 339 aaKnown RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 NPRL2Q8WTW4 380 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 SMIM19Q96E16 107 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 ADAT3Q96EY9 351 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 MRI1Q9BV20 369 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 CDCA4Q9BXL8 241 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 PKIBQ9C010 78 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 METTL17Q9H7H0 456 aaPredicted RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 FKBP14Q9NWM8 211 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 NLKQ9UBE8 527 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 KAAG1Q9UBP8 84 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 CKLFQ9UBR5 152 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
PNKP-226ENST00000636840 OR2AT4A6NND4 320 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 F5H0A9 414 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 DENRO43583 198 aaKnown RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 MRPS14O60783 128 aaKnown RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 MT-ND2P03891 347 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 CD1AP06126 327 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 HCKP08631 526 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 SRD5A1P18405 259 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 CELP19835 753 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 AZGP1P25311 298 aaKnown RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 MAPK3P27361 379 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 SOX2P48431 317 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 PPP3R1P63098 170 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 IL13RA1P78552 427 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 ACSM1Q08AH1 577 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 GPR50Q13585 617 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 SPHARQ15513 63 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 MED22Q15528 200 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 YIF1BQ5BJH7 314 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 DMRTC1Q5HYR2 192 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 FAM120AOSQ5T036 256 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 ATPAF1Q5TC12 328 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 WDR25Q64LD2 544 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 DMKNQ6E0U4 476 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 LAIR2Q6ISS4 152 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 WDR86Q86TI4 376 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 ANGPTL5Q86XS5 388 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 PARP16Q8N5Y8 322 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 PNLDC1Q8NA58 520 aaKnown RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 C19orf18Q8NEA5 215 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 OR5T2Q8NGG2 359 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 OR13C9Q8NGT0 318 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 RAB40AQ8WXH6 277 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 GHSRQ92847 366 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 OPALINQ96PE5 141 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 GPER1Q99527 375 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 S100A13Q99584 98 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 CCL13Q99616 98 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 DUSP21Q9H596 190 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 RHOFQ9HBH0 211 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 PCDHB16Q9NRJ7 776 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
PNKP-226ENST00000636840 AUP1Q9Y679 476 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 TANC2Q9HCD6 1990 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 NAV3Q8IVL0 2385 aa6.87□□□□□ -1.31
PNKP-226ENST00000636840 C2CD3Q4AC94 2353 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 IGHV3OR15-7A0A075B7D8 119 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 A8MXK9 166 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 DVL1O14640 695 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 PHF1O43189 567 aaPredicted RBP6.86□□□□□ -1.31
PNKP-226ENST00000636840 SULT1B1O43704 296 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 ENSAO43768 121 aaKnown RBP6.86□□□□□ -1.31
PNKP-226ENST00000636840 RHBDL1O75783 438 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 FAM157CP0CG43 387 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 PGA5P0DJD9 388 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 TMEM225BP0DP42 221 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 CRHBPP24387 322 aa6.86□□□□□ -1.31
PNKP-226ENST00000636840 MPZP25189 248 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms