RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CHST5Q9GZS9 411 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 PNRC2Q9NPJ4 139 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 PUS1Q9Y606 427 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 PCNX3Q9H6A9 2034 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 K7N7A8 449 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 ZNF43P17038 809 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 GABRG2P18507 467 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 CTSSP25774 331 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 FOXF1Q12946 379 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 HIKESHIQ53FT3 197 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 KLHDC7BQ96G42 594 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 BSCL2Q96G97 398 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 ZDHHC12Q96GR4 267 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 PGAM5Q96HS1 289 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 SDHAF3Q9NRP4 125 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 NECAP2Q9NVZ3 263 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 VDAC3Q9Y277 283 aa12.98□□□□□ -0.33
CACNA1A-220ENST00000635988 IGKV1D-8A0A087WSZ0 117 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 H3BML4 177 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 RER1O15258 196 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 PLXDC2Q6UX71 529 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 CCDC54Q8NEL0 328 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 AKR7LQ8NHP1 331 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 MR1Q95460 341 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 CDCA3Q99618 268 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 MCTS1Q9ULC4 181 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 H3BMH7 237 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 ETV2O00321 342 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 C1QL1O75973 258 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 EFNA3P52797 238 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 ZNF266Q14584 549 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 FBXW12Q6X9E4 464 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 LGI3Q8N145 548 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 OR6X1Q8NH79 312 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 RTN4IP1Q8WWV3 396 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 HAS2Q92819 552 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-220ENST00000635988 CXorf65A6NEN9 183 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 YIF1AO95070 293 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 IGLV3-1P01715 115 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 CA3P07451 260 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 OR5AC1P0C628 307 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 TMEM225BP0DP42 221 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 FCGR2AP12318 317 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 CDAP32320 146 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 CD81P60033 236 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 RNF4P78317 190 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 GNMTQ14749 295 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 PYY3Q5JQD4 70 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 DNLZQ5SXM8 178 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 CRIP3Q6Q6R5 217 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 FIP1L1Q6UN15 594 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 APCDD1LQ8NCL9 501 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 SGK3Q96BR1 496 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 C10orf35Q96D05 121 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 C18orf12Q96KH6 178 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 MRGPRX4Q96LA9 322 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 SYT3Q9BQG1 590 aa12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 MTIF3Q9H2K0 278 aaKnown RBP12.96□□□□□ -0.33
CACNA1A-220ENST00000635988 A0A0U1RQV5 110 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 DHRS3O75911 302 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 DIRAS3O95661 229 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 F10P00742 488 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 FOSL2P15408 326 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 DTYMKP23919 212 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 PPP1CCP36873 323 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 MYBPHQ13203 477 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 TMEM182Q6ZP80 229 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF610Q8N9Z0 462 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 VN1R1Q9GZP7 353 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 SIRT7Q9NRC8 400 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 TCFL5Q9UL49 500 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 V9GYS6 101 aa12.96□□□□□ -0.34
CACNA1A-220ENST00000635988 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 C2orf72A6NCS6 295 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 XRCC2O43543 280 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 ITGA3P26006 1051 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 MSX1P28360 303 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF41P51814 821 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 NDUFA6P56556 154 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 MFAP5Q13361 173 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 PRSS58Q8IYP2 241 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 NPRL2Q8WTW4 380 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 DOK5Q9P104 306 aa12.95□□□□□ -0.34
CACNA1A-220ENST00000635988 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms