RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 EFNA4P52798 201 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 ACTG1P63261 375 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 GALK2Q01415 458 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.75
LINC00550-201ENST00000629293 CBFBQ13951 182 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 HIKESHIQ53FT3 197 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 BCL2L15Q5TBC7 163 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 C12orf54Q6X4T0 127 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 DNM1P46Q6ZS02 220 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 TMPPEQ6ZT21 453 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 C9orf62Q8N4C0 152 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 OR11H7Q8NGC8 314 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 OR6K6Q8NGW6 343 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 C10orf105Q8TEF2 133 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 SORCS2Q96PQ0 1159 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 TSPAN32Q96QS1 320 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 DPAGT1Q9H3H5 408 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 NUDT15Q9NV35 164 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 COPZ2Q9P299 210 aa4.15□□□□□ -1.75
LINC00550-201ENST00000629293 ING1Q9UK53 422 aaPredicted RBP4.15□□□□□ -1.75
LINC00550-201ENST00000629293 AK6Q9Y3D8 172 aaKnown RBP4.15□□□□□ -1.75
LINC00550-201ENST00000629293 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 A0A1W2PPK0 400 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 LYNX1G3V0Z9 82 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 DCTN6O00399 190 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 BGLAPP02818 100 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 LYNX1P0DP58 116 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 PDLIM4P50479 330 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SNRPD2P62316 118 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 CSNK2A1P68400 391 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SRSF3P84103 164 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 RPL18Q07020 188 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 LOXL1Q08397 574 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 FCN2Q15485 313 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ALG10Q5BKT4 473 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 BTN2A1Q7KYR7 527 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 LRRTM1Q86UE6 522 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 OR14K1Q8NGZ2 314 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GRPEL2Q8TAA5 225 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GCDHQ92947 438 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 OR2M2Q96R28 347 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 MNTQ99583 582 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 AUNIPQ9H7T9 357 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 NANSQ9NR45 359 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 MRPL39Q9NYK5 338 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF346Q9UL40 294 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 FKBP7Q9Y680 259 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TRRAPQ9Y4A5 3859 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 MEGF8Q7Z7M0 2845 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ACOD1A6NK06 481 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF593O00488 134 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 PDCD5O14737 125 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TPPPO94811 219 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SCGB1D1O95968 90 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 CALCBP10092 127 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ADRA2CP18825 462 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 PGCP20142 388 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 DSCR9P59020 149 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TGFBR3Q03167 851 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ALKBH1Q13686 389 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GSG1Q2KHT4 349 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GPR139Q6DWJ6 353 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TOMM5Q8N4H5 51 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM234Q8WY98 164 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TAAR8Q969N4 342 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TSSK2Q96PF2 358 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ALKBH3Q96Q83 286 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 PTDSS2Q9BVG9 487 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 DYNLRB1Q9NP97 96 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SLC7A10Q9NS82 523 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SLC25A15Q9Y619 301 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ARHGAP32A7KAX9 2087 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ANK2Q01484 3957 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 YLPM1P49750 1951 aaKnown RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ARPC4-TTLL3A0A0A6YYG9 625 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TMEM72A0PK05 275 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 OR4C45A6NMZ5 311 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 B5MCH6 92 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 BLOC1S5-TXNDC5H3BN57 136 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GABARAPH6UMI1 98 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 CYTIPO60759 359 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 NPIPB7O75200 414 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ZNF254O75437 659 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 AKR7A3O95154 331 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 DHFRP00374 187 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 IGHMP01871 453 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SULT1A3P0DMM9 295 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 SULT1A4P0DMN0 295 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 OR8G3PP0DMU2 310 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ALOX5APP20292 161 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 STOMP27105 288 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GIFP27352 417 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TACR3P29371 465 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 GRPRP30550 384 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 APOBEC3AP31941 199 aaPredicted RBP4.14□□□□□ -1.75
LINC00550-201ENST00000629293 Q499Y3 187 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 ELFN2Q5R3F8 820 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 C6orf183Q5T699 404 aa4.14□□□□□ -1.75
LINC00550-201ENST00000629293 TSPO2Q5TGU0 170 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms