RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SAXO1Q8IYX7 474 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 TERB2Q8NHR7 220 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 EMG1Q92979 244 aaKnown RBP19.03■□□□□ 0.64
PNKP-220ENST00000627232 WBP1Q96G27 269 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 PAPOLGQ9BWT3 736 aaKnown RBP19.03■□□□□ 0.64
PNKP-220ENST00000627232 GPR160Q9UJ42 338 aa19.03■□□□□ 0.64
PNKP-220ENST00000627232 AHRRA9YTQ3 701 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 RGS11O94810 467 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 PLATP00750 562 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 NGFP01138 241 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 IL2RAP01589 272 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 SNU13P55769 128 aaKnown RBP19.02■□□□□ 0.64
PNKP-220ENST00000627232 TAS2R31P59538 309 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 SNRPD2P62316 118 aaKnown RBP19.02■□□□□ 0.64
PNKP-220ENST00000627232 DHRS2Q13268 280 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 CEACAM21Q3KPI0 293 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 OR2A2Q6IF42 318 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 C6orf201Q7Z4U5 140 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 LYG2Q86SG7 212 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 ZDHHC23Q8IYP9 409 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 SLC30A7Q8NEW0 376 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 Q8NFD4 153 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 OR51F2Q8NH61 342 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 TMPRSS13Q9BYE2 586 aa19.02■□□□□ 0.64
PNKP-220ENST00000627232 F5H5P2 479 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 IGHV1-2P23083 117 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 ZBTB25P24278 435 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 CHATP28329 748 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 WNT5AP41221 380 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 HLXQ14774 488 aaPredicted RBP19.01■□□□□ 0.63
PNKP-220ENST00000627232 TAF9Q16594 264 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 Q6ZT83 130 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 OR6K3Q8NGY3 331 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 BOD1Q96IK1 185 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 SCGB3A2Q96PL1 93 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 ST6GALNAC5Q9BVH7 336 aa19.01■□□□□ 0.63
PNKP-220ENST00000627232 GOSR2O14653 212 aa19■□□□□ 0.63
PNKP-220ENST00000627232 SLC22A5O76082 557 aa19■□□□□ 0.63
PNKP-220ENST00000627232 PMELP40967 661 aa19■□□□□ 0.63
PNKP-220ENST00000627232 OR3A3P47888 321 aa19■□□□□ 0.63
PNKP-220ENST00000627232 UBE2MP61081 183 aaKnown RBP19■□□□□ 0.63
PNKP-220ENST00000627232 TBC1D28Q2M2D7 210 aa19■□□□□ 0.63
PNKP-220ENST00000627232 C2orf68Q2NKX9 166 aa19■□□□□ 0.63
PNKP-220ENST00000627232 NKAPLQ5M9Q1 402 aa19■□□□□ 0.63
PNKP-220ENST00000627232 ASCL5Q7RTU5 278 aa19■□□□□ 0.63
PNKP-220ENST00000627232 ZNF611Q8N823 705 aa19■□□□□ 0.63
PNKP-220ENST00000627232 OR5AP2Q8NGF4 316 aa19■□□□□ 0.63
PNKP-220ENST00000627232 TAAR6Q96RI8 345 aa19■□□□□ 0.63
PNKP-220ENST00000627232 OPN4Q9UHM6 478 aa19■□□□□ 0.63
PNKP-220ENST00000627232 EDARQ9UNE0 448 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A10PA6NDY2 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A18PA6NE21 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A16PA6NEW6 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A20PA6NIJ5 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A8PA6NJQ4 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A7PA6NKC0 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 CD300LBA8K4G0 201 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A22PA8MWA6 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A12PA8MX19 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A5PA8MXJ8 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A23PA8MXZ1 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 WISP2O76076 250 aa19■□□□□ 0.63
PNKP-220ENST00000627232 TPOP07202 933 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A15PP0C7V4 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A13PP0C7W8 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A14PP0C7W9 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 FAM90A24PP0C7X0 464 aa19■□□□□ 0.63
PNKP-220ENST00000627232 H2BFSP57053 126 aa19■□□□□ 0.63
PNKP-220ENST00000627232 UBE2NP61088 152 aaKnown RBP19■□□□□ 0.63
PNKP-220ENST00000627232 LGALSLQ3ZCW2 172 aaPredicted RBP19■□□□□ 0.63
PNKP-220ENST00000627232 NSUN5P2Q63ZY6 315 aa19■□□□□ 0.63
PNKP-220ENST00000627232 RPUSD3Q6P087 351 aaKnown RBP19■□□□□ 0.63
PNKP-220ENST00000627232 LPCAT3Q6P1A2 487 aa19■□□□□ 0.63
PNKP-220ENST00000627232 ZNF767PQ75MW2 155 aa19■□□□□ 0.63
PNKP-220ENST00000627232 LHFPL1Q86WI0 220 aa19■□□□□ 0.63
PNKP-220ENST00000627232 CALHM1Q8IU99 346 aa19■□□□□ 0.63
PNKP-220ENST00000627232 GCNT2Q8N0V5 402 aa19■□□□□ 0.63
PNKP-220ENST00000627232 UXS1Q8NBZ7 420 aa19■□□□□ 0.63
PNKP-220ENST00000627232 OR5A2Q8NGI9 324 aa19■□□□□ 0.63
PNKP-220ENST00000627232 MPC1Q9Y5U8 109 aa19■□□□□ 0.63
PNKP-220ENST00000627232 PRSS44E7EML9 344 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 RRP8O43159 456 aaKnown RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 HLA-AP01891 365 aaKnown RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 ZNF14P17017 642 aaPredicted RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 DTYMKP23919 212 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 CD34P28906 385 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 KIR2DL2P43627 348 aaPredicted RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 RBM11P57052 281 aaKnown RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 TSPAN5P62079 268 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 MRPL49Q13405 166 aaKnown RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 GRK1Q15835 563 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 GABRA6Q16445 453 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 CHRFAM7AQ494W8 412 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 ACSF3Q4G176 576 aaPredicted RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 ELP2Q6IA86 826 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 INO80CQ6PI98 192 aaPredicted RBP18.99■□□□□ 0.63
PNKP-220ENST00000627232 C17orf107Q6ZR85 190 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 Q6ZS92 163 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 TMEM200AQ86VY9 491 aa18.99■□□□□ 0.63
PNKP-220ENST00000627232 FBXL14Q8N1E6 418 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms