RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ELOBQ15370 118 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 SP6Q3SY56 376 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 TCTN2Q96GX1 697 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 TMED3Q9Y3Q3 217 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 F5P12259 2224 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 F10P00742 488 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 AFF3P51826 1226 aaKnown RBP12.38□□□□□ -0.43
LDB3-209ENST00000623056 BIDP55957 195 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 DCAF7P61962 342 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 TLE3Q04726 772 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 C1orf61Q13536 156 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 MEGF10Q96KG7 1140 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 C5orf34Q96MH7 638 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 NELFAQ9H3P2 528 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 MCTS1Q9ULC4 181 aaKnown RBP12.38□□□□□ -0.43
LDB3-209ENST00000623056 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
LDB3-209ENST00000623056 POLR1DQ9Y2S0 133 aa12.38□□□□□ -0.43
LDB3-209ENST00000623056 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 TLCD2A6NGC4 264 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 RRP8O43159 456 aaKnown RBP12.37□□□□□ -0.43
LDB3-209ENST00000623056 KLF8O95600 359 aaPredicted RBP12.37□□□□□ -0.43
LDB3-209ENST00000623056 SOD3P08294 240 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 GIMD1P0DJR0 217 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 GAMTQ14353 236 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 RSU1Q15404 277 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 NPRL2Q8WTW4 380 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 CHST11Q9NPF2 352 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 NPIPB13A6NJU9 1138 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 NPIPB4C9JG80 1138 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 ZNF587BE7ETH6 402 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 RPL36A-HNRNPH2H7BZ11 118 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HSD17B6O14756 317 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 PPP1R2P9O14990 202 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HEXBP07686 556 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 KLK2P20151 261 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 AKT2P31751 481 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 PIGPP57054 158 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 ERVFRD-1P60508 538 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 UBE2KP61086 200 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HYAL1Q12794 435 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 TMEM187Q14656 261 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 KISS1Q15726 138 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HAGHQ16775 308 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 PDZD11Q5EBL8 140 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 CRIP3Q6Q6R5 217 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 REC114Q7Z4M0 266 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 DMRTC2Q8IXT2 367 aaPredicted RBP12.37□□□□□ -0.43
LDB3-209ENST00000623056 HIST3H2BBQ8N257 126 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 STT3BQ8TCJ2 826 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 NUDT22Q9BRQ3 303 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
LDB3-209ENST00000623056 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
LDB3-209ENST00000623056 WWTR1Q9GZV5 400 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 KCNIP3Q9Y2W7 256 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 HS3ST3B1Q9Y662 390 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
LDB3-209ENST00000623056 VCANP13611 3396 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 RP1P56715 2156 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 A0A087WWC5 75 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 IGKV3D-11A0A0A0MRZ8 115 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 NSG1A0A0A6YYJ2 146 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 TGIF2-C20orf24A0A0A6YYL0 155 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 B4DGG1 531 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 H0YL77 283 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CD63P08962 238 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 OR5AC1P0C628 307 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CCL1P22362 96 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CEBPGP53567 150 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 UBE2V2Q15819 145 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 C6orf201Q7Z4U5 140 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 LYZL2Q7Z4W2 148 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 OR2AJ1Q8NGZ0 328 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 REEP6Q96HR9 211 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 LIME1Q9H400 295 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 KLHL13Q9P2N7 655 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 PRUNE2Q8WUY3 3088 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 ZNF43P17038 809 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 DDTP30046 118 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CDAP32320 146 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 OR1D4P47884 311 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 ASCL1P50553 236 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 RND3P61587 244 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 DLK1P80370 383 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 FAM57BQ71RH2 274 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 DOK3Q7L591 496 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CCDC54Q8NEL0 328 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 OR52M1Q8NGK5 317 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
LDB3-209ENST00000623056 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.36□□□□□ -0.43
LDB3-209ENST00000623056 FGF14Q92915 247 aa12.36□□□□□ -0.43
LDB3-209ENST00000623056 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms