RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SYNGR1O43759 233 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 RGS9O75916 674 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 NXPH2O95156 264 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 RPSAP08865 295 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 LIMS3P0CW19 117 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 LIMS4P0CW20 117 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 ETV1P50549 477 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 FUT6P51993 359 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 SMIM21Q3B7S5 101 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 OR2G6Q5TZ20 316 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 STUMQ69YW2 141 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 ANGPTL5Q86XS5 388 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 POC1AQ8NBT0 407 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 OR51A4Q8NGJ6 313 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 NRG4Q8WWG1 115 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 TFAP2CQ92754 450 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 ADAT3Q96EY9 351 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 MED30Q96HR3 178 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 ZNF488Q96MN9 340 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 ZNF649Q9BS31 505 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 CAB39Q9Y376 341 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 SVEP1Q4LDE5 3571 aa11.61□□□□□ -0.55
PCDHGC3-208ENST00000622836 A0A1B0GW55 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 RNF212BA8MTL3 300 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 E9PI62 339 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 INMTO95050 263 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ZFPL1O95159 310 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ECDO95905 644 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 TFF1P04155 84 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 LIPFP07098 398 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PRKACBP22694 351 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ATP1B3P54709 279 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 AQP4P55087 323 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 IL13RA1P78552 427 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PAX2Q02962 417 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PAX8Q06710 450 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 BTN2A1Q7KYR7 527 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 BATF2Q8N1L9 274 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 STX19Q8N4C7 294 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 BPIFB6Q8NFQ5 453 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 OR10AC1Q8NH08 325 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ANGPTL6Q8NI99 470 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 ZNF418Q8TF45 676 aaPredicted RBP11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 GGHQ92820 318 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PDCD1LG2Q9BQ51 273 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PCGF1Q9BSM1 259 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 PKIBQ9C010 78 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DNTTIP1Q9H147 329 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 DHDHQ9UQ10 334 aa11.6□□□□□ -0.55
PCDHGC3-208ENST00000622836 MYL12BO14950 172 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 CYB5AP00167 134 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 NDUFB7P17568 137 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 ATF1P18846 271 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 FPR2P25090 351 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 AZGP1P25311 298 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 TGM4P49221 684 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 POU3F4P49335 361 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 RBP2P50120 134 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 CAPZA1P52907 286 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 MTCP1P56278 107 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 FGF12P61328 243 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 IL24Q13007 206 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 ATPAF1Q5TC12 328 aaPredicted RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 METTL11BQ5VVY1 283 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 ACP7Q6ZNF0 438 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 AHSA2Q719I0 299 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 UTS2BQ765I0 119 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 OR13C9Q8NGT0 318 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 GATAD2BQ8WXI9 593 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 C22orf15Q8WYQ4 148 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 TMEM158Q8WZ71 300 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 GAFA1Q96PS6 74 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 NEK6Q9HC98 313 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 CNOT2Q9NZN8 540 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 SLC25A10Q9UBX3 287 aaPredicted RBP11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 OR14J1Q9UGF5 321 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 CLEC2DQ9UHP7 191 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 NUP50Q9UKX7 468 aa11.59□□□□□ -0.55
PCDHGC3-208ENST00000622836 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms