RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ING4Q9UNL4 249 aa15.14■□□□□ 0.01
PTCHD3-202ENST00000622555 LOC100289279A0A1B0GTE1 492 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 LRP5LA4QPB2 252 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 ANGPTL7O43827 346 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 BPNT1O95861 308 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 IGHV1-46P01743 117 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 GRPP07492 148 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 RANBP1P43487 201 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 MAB21L1Q13394 359 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 C2orf76Q3KRA6 126 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 HAGHLQ6PII5 290 aaPredicted RBP15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 C1QL2Q7Z5L3 287 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 ZNF611Q8N823 705 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 SAMD12Q8N8I0 201 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 ELL3Q9HB65 397 aaPredicted RBP15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 SPATA2Q9UM82 520 aa15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 HELZ2Q9BYK8 2649 aaKnown RBP15.13■□□□□ 0.01
PTCHD3-202ENST00000622555 COL12A1Q99715 3063 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 HPGDSO60760 199 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 PTTG1O95997 202 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 TNFSF4P23510 183 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 CD200P41217 278 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 CAPZA1P52907 286 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SNRPD2P62316 118 aaKnown RBP15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 ZNF154Q13106 437 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM76BQ5HYJ3 339 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SLC25A26Q70HW3 274 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 ZNF554Q86TJ5 538 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 UBTD1Q9HAC8 227 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 ETV7Q9Y603 341 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 HRNRQ86YZ3 2850 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 C17orf100A8MU93 164 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 UBBP0CG47 229 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SCAND1P57086 179 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 TNFAIP6P98066 277 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SWI5Q1ZZU3 235 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SLC22A6Q4U2R8 563 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 PRAMEF6Q5VXH4 476 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 METAP1DQ6UB28 335 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 POC5Q8NA72 575 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 SCCPDHQ8NBX0 429 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 OR51F2Q8NH61 342 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 OR2V2Q96R30 315 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 DIRC2Q96SL1 478 aa15.12■□□□□ 0.01
PTCHD3-202ENST00000622555 TENM4Q6N022 2769 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 DOPEY2Q9Y3R5 2298 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 TMEM272A0A1B0GTI8 110 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 A6NLC8 198 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 J3QT63 122 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 CYB5AP00167 134 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 PTBP1P26599 531 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 SRP9P49458 86 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 RSU1Q15404 277 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 AGAP6Q5VW22 663 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 OR10K2Q6IF99 312 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 MKXQ8IYA7 352 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 ZCCHC24Q8N2G6 241 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 GDPD1Q8N9F7 314 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 ZSCAN4Q8NAM6 433 aaPredicted RBP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 OR10K1Q8NGX5 313 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 SETD6Q8TBK2 473 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 SLAMF9Q96A28 289 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 MEGF10Q96KG7 1140 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 C1orf147Q96MC9 270 aaPredicted RBP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 PKIBQ9C010 78 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 METTL9Q9H1A3 318 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 MS4A5Q9H3V2 200 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 UFSP2Q9NUQ7 469 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 GHRLQ9UBU3 117 aa15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 RAI1Q7Z5J4 1906 aaPredicted RBP15.11■□□□□ 0.01
PTCHD3-202ENST00000622555 USP9YO00507 2555 aaPredicted RBP15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 IGKV1-12A0A0C4DH73 117 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM221AA4D161 298 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 SYNGR1O43759 233 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 CTAG2O75638 210 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 IGKV1D-12P01611 117 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 VSIG8P0DPA2 414 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 PLA2G7Q13093 441 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 UBE2NLQ5JXB2 153 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 CELF2-AS1Q8N7Q2 184 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 PXT1Q8NFP0 134 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 ITLN1Q8WWA0 313 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 AQP3Q92482 292 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM46BQ96A09 425 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 CBLN4Q9NTU7 201 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 RHBDL2Q9NX52 303 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 IL19Q9UHD0 177 aa15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 UTP20O75691 2785 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-202ENST00000622555 FABP12A6NFH5 140 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM25AB3EWG3 89 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM25CB3EWG5 89 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 FAM25GB3EWG6 89 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CDIPTO14735 213 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CRTAPO75718 401 aaPredicted RBP15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 ADH4P08319 380 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 SERPINA2P20848 420 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 MPZP25189 248 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 DEFA1P59665 94 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 DEFA3P59666 94 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 IL24Q13007 206 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms