RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MOV10Q9HCE1 1003 aaKnown RBP18.41■□□□□ 0.54
SPAST-204ENST00000621856 PCDHB16Q9NRJ7 776 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 IL36GQ9NZH8 169 aa18.41■□□□□ 0.54
SPAST-204ENST00000621856 BOLA2-SMG1P6H3BVE0 249 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 DHFRP00374 187 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 RAC2P15153 192 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 CA6P23280 308 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 ZNF83P51522 516 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 PNLIPRP3Q17RR3 467 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 MRGPRGQ86SM5 289 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 ZSCAN4Q8NAM6 433 aaPredicted RBP18.4■□□□□ 0.54
SPAST-204ENST00000621856 OR5P3Q8WZ94 311 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 MUCL1Q96DR8 90 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 NKIRAS2Q9NYR9 191 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 MAP1BP46821 2468 aaKnown RBP18.4■□□□□ 0.54
SPAST-204ENST00000621856 IGHV2OR16-5A0A0B4J2B6 119 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 MFNGO00587 321 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 H2AFB2P0C5Z0 115 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 SELEP16581 610 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 HAAOP46952 286 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 ARFRP1Q13795 201 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 OSR2Q8N2R0 312 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 ACTR6Q9GZN1 396 aa18.4■□□□□ 0.54
SPAST-204ENST00000621856 OR5B21A6NL26 309 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 FOXI3A8MTJ6 420 aaPredicted RBP18.39■□□□□ 0.53
SPAST-204ENST00000621856 M0R1B8 84 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 RAB3DO95716 219 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 CD300CQ08708 224 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 C11orf91Q3C1V1 193 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 OR4D10Q8NGI6 311 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 PECRQ9BY49 303 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 BCL2L14Q9BZR8 327 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 C20orf85Q9H1P6 137 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 ZNF107Q9UII5 783 aaPredicted RBP18.39■□□□□ 0.53
SPAST-204ENST00000621856 KCNK7Q9Y2U2 307 aa18.39■□□□□ 0.53
SPAST-204ENST00000621856 ZNF736B4DX44 427 aaPredicted RBP18.38■□□□□ 0.53
SPAST-204ENST00000621856 SSX5O60225 188 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 HLA-DMAP28067 261 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 GNG3P63215 75 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 FAM27E3Q08E93 113 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 ARL6IP1Q15041 203 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 PPA1Q15181 289 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 OR56B4Q8NH76 319 aa18.38■□□□□ 0.53
SPAST-204ENST00000621856 KLF14Q8TD94 323 aaPredicted RBP18.38■□□□□ 0.53
SPAST-204ENST00000621856 IQCF6A8MYZ5 107 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 SFTPBP07988 381 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 CALCRP30988 508 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 MPV17P39210 176 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 PSG7Q13046 419 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 TAF9Q16594 264 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 NKAPLQ5M9Q1 402 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 MKXQ8IYA7 352 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 SAXO1Q8IYX7 474 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 FBXL14Q8N1E6 418 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 GVQW1Q8N7I0 195 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 SLAMF9Q96A28 289 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 FAM122AQ96E09 287 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 MRPS24Q96EL2 167 aaKnown RBP18.37■□□□□ 0.53
SPAST-204ENST00000621856 MARS2Q96GW9 593 aaKnown RBP18.37■□□□□ 0.53
SPAST-204ENST00000621856 MICU1Q9BPX6 476 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 OR10A4Q9H209 315 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■■■ 27.9
SPAST-204ENST00000621856 HMX3A6NHT5 357 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 M0QYG6 137 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 TUBG1P23258 451 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 CASP6P55212 293 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 NAAAQ02083 359 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 PIGYQ3MUY2 71 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 OR4S1Q8NGB4 309 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 RTL8AQ9BWD3 113 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 PRORYQ9H606 182 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 TUBG2Q9NRH3 451 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 PLEKHJ1Q9NW61 149 aa18.37■□□□□ 0.53
SPAST-204ENST00000621856 NOP16Q9Y3C1 178 aaKnown RBP18.37■□□□□ 0.53
SPAST-204ENST00000621856 RP1L1Q8IWN7 2480 aaPredicted RBP18.36■□□□□ 0.53
SPAST-204ENST00000621856 TRGV8A0A0C4DH27 118 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 RAG2P55895 527 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 ALKBH6Q3KRA9 238 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 ZNF573Q86YE8 665 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 BATF2Q8N1L9 274 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 OR51S1Q8NGJ8 323 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 RND1Q92730 232 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 ADAT1Q9BUB4 502 aaKnown RBP18.36■□□□□ 0.53
SPAST-204ENST00000621856 ELOVL5Q9NYP7 299 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 FLVCR2Q9UPI3 526 aa18.36■□□□□ 0.53
SPAST-204ENST00000621856 PRR14LQ5THK1 2151 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 SERPINE3A8MV23 424 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 CCNKO75909 580 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 NDUFB6O95139 128 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 CD74P04233 296 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 BCL3P20749 454 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 CBX5P45973 191 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 NPBWR2P48146 333 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 C3orf36Q3SXR2 165 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 ZNF718Q3SXZ3 478 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 TMEM211Q6ICI0 200 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 OR52W1Q6IF63 320 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 HAGHLQ6PII5 290 aaPredicted RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 C6orf201Q7Z4U5 140 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 LIX1LQ8IVB5 337 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms