RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.37
COLCA1-205ENST00000620864 EXOSC7Q15024 291 aaKnown RBP6.46□□□□□ -1.37
COLCA1-205ENST00000620864 LINC00469Q8N7U9 141 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 SPSB1Q96BD6 273 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 NAA60Q9H7X0 242 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 SLC7A10Q9NS82 523 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 A0A0A6YYC8 382 aaPredicted RBP6.46□□□□□ -1.37
COLCA1-205ENST00000620864 I3L1I5 382 aaPredicted RBP6.46□□□□□ -1.37
COLCA1-205ENST00000620864 LDB3O75112 727 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 UBE2V2Q15819 145 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 NSUN5P2Q63ZY6 315 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 SLC48A1Q6P1K1 146 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 MARCH1Q8TCQ1 289 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 RPS4Y2Q8TD47 263 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 CTSFQ9UBX1 484 aa6.46□□□□□ -1.37
COLCA1-205ENST00000620864 MS4A18H0YCH9 400 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PPM1DO15297 605 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 SLC38A11Q08AI6 406 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 MS4A18Q3C1V0 323 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 STPG1Q5TH74 334 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 FAM71E1Q6IPT2 247 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 JMJD6Q6NYC1 403 aaPredicted RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 WFDC8Q8IUA0 241 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 FAM169BQ8N8A8 192 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 C19orf47Q8N9M1 422 aaKnown RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM174Q8WUU8 243 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ELSPBP1Q96BH3 223 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 MS4A8Q9BY19 250 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PRSS50Q9UI38 385 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 CTDSPLO15194 276 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 SLC25A5P05141 298 aaKnown RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 MELTFP08582 738 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 HIST1H1EP10412 219 aaKnown RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 BTG2P78543 158 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 HYAL1Q12794 435 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF345Q14585 488 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 OR1N1Q8NGS0 311 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM255BQ8WV15 326 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PIGTQ969N2 578 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 NEURL2Q9BR09 285 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 BRWD1Q9NSI6 2320 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ARFGEF2Q9Y6D5 1785 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 LAMB1P07942 1786 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 DSCR3O14972 297 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ZBTB25P24278 435 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 CEBPDP49716 269 aaPredicted RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PNLIPRP2P54317 469 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TRILQ7L0X0 811 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TMEM183AQ8IXX5 376 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 SLAMF6Q96DU3 332 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 MOGAT1Q96PD6 335 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 HDAC8Q9BY41 377 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ANKRD10Q9NXR5 420 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TECRQ9NZ01 308 aaKnown RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 TBX21Q9UL17 535 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PAPPAQ13219 1627 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 FITM1A5D6W6 292 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 M0R3E3 92 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 CTNSO60931 367 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 SFT2D2O95562 160 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 GHRHP01286 108 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 SULT1A1P50225 295 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 OR1D5P58170 312 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 DUSP8Q13202 625 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 OR2B11Q5JQS5 317 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 FAHD1Q6P587 224 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 NUFIP2Q7Z417 695 aaKnown RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 OSR2Q8N2R0 312 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ARIH2OSQ8N7S6 290 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 PARP11Q9NR21 331 aa6.46□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF275Q9NSD4 429 aaPredicted RBP6.46□□□□□ -1.38
COLCA1-205ENST00000620864 A0A1B0GV90 55 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 CXorf65A6NEN9 183 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 TNFSF15O95150 251 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 NDUFB7P17568 137 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 FAM78BQ5VT40 261 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 PRAMEF20Q5VT98 475 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 ZDHHC23Q8IYP9 409 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 C10orf126Q8N4M7 172 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 OIT3Q8WWZ8 545 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 IP6K3Q96PC2 410 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 ACER3Q9NUN7 267 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 CGGBP1Q9UFW8 167 aaPredicted RBP6.45□□□□□ -1.38
COLCA1-205ENST00000620864 TRBV23-1A0A0A0MS06 115 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 DIRC3C9JPN6 131 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 GPANK1O95872 356 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 HBZP02008 142 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 RPS16P62249 146 aaKnown RBP6.45□□□□□ -1.38
COLCA1-205ENST00000620864 DCDP81605 110 aaKnown RBP6.45□□□□□ -1.38
COLCA1-205ENST00000620864 AESQ08117 197 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 AWAT1Q58HT5 328 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 MRGPRGQ86SM5 289 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 DMRT1Q9Y5R6 373 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 ZNF785A8K8V0 405 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 FAM131CQ96AQ9 280 aa6.45□□□□□ -1.38
COLCA1-205ENST00000620864 PDXPQ96GD0 296 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms