RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ID4P47928 161 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 PMP22Q01453 160 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ETFRF1Q6IPR1 90 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 MAMSTRQ6ZN01 415 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 DRAXINQ8NBI3 349 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SCARB1Q8WTV0 552 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 OR2D2Q9H210 308 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 SLC35D1Q9NTN3 355 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 OR6C68A6NDL8 312 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 HYAL3O43820 417 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-219ENST00000620786 IGHV3-13P01766 116 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TGFBR1P36897 503 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 PTGFRP43088 359 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF90Q03938 601 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 GAB4Q2WGN9 574 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF788Q6ZQV5 615 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 LHX4Q969G2 390 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 IL20Q9NYY1 176 aa10.11□□□□□ -0.79
CLIP1-219ENST00000620786 FGF2P09038 288 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 CBR1P16152 277 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 SPINK2P20155 84 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 FOXO1Q12778 655 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 GPNMBQ14956 572 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 UBE3DQ7Z6J8 389 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 CLEC5AQ9NY25 188 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 ERRFI1Q9UJM3 462 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-219ENST00000620786 A0A0A6YYJ9 748 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 B4E171 279 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 K7ESF4 209 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 CD160O95971 181 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 TSPAN7P41732 249 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 MLF1P58340 268 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 PTP4A1Q93096 173 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 LPAR2Q9HBW0 351 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 OR6C3Q9NZP0 311 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 URGCP-MRPS24S4R325 110 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM272A0A1B0GTI8 110 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 RAB19A4D1S5 217 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 TSTD3H0UI37 97 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 DCTDP32321 178 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 LPAR6P43657 344 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 ZFP36L2P47974 494 aaKnown RBP10.1□□□□□ -0.79
CLIP1-219ENST00000620786 BTN1A1Q13410 526 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 OR2F1Q13607 317 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 NECAP1Q8NC96 275 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 ARHGAP5-AS1Q96IT6 56 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 FAAP24Q9BTP7 215 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 DBX1A6NMT0 343 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 AKR7A2O43488 359 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF205O95201 554 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 SLC25A4P12235 298 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 TNXAQ16473 311 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 HIKESHIQ53FT3 197 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 SH2D5Q6ZV89 423 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 OR4F17Q8NGA8 305 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 RASL11BQ9BPW5 248 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 FBXO8Q9NRD0 319 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 IL36GQ9NZH8 169 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 MPC1Q9Y5U8 109 aa10.1□□□□□ -0.79
CLIP1-219ENST00000620786 ASPDHA6ND91 283 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 OR5B21A6NL26 309 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 RRASP10301 218 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 CDKN2AP42771 156 aaKnown RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 PRSS12P56730 875 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 SSBP1Q04837 148 aaKnown RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 ASAH1Q13510 395 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 FAM27D1Q5T7N8 215 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 MOGAT1Q96PD6 335 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 LIPT2A6NK58 231 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 LGALS7P47929 136 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 CNN1P51911 297 aaKnown RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 RHOBP62745 196 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 CDK5Q00535 292 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 OR4C16Q8NGL9 310 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 ABHD3Q8WU67 409 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 RPUSD4Q96CM3 377 aaKnown RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 UQCC2Q9BRT2 126 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 SEBOXQ9HB31 216 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 PLXNB2O15031 1838 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 H3BP45 60 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 MPGP29372 298 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 SELENOPP49908 381 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 ZG16BQ96DA0 208 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 GMPPAQ96IJ6 420 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-219ENST00000620786 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 CLCF1Q9UBD9 225 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 TRAPPC4Q9Y296 219 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 GOLT1BQ9Y3E0 138 aa10.09□□□□□ -0.79
CLIP1-219ENST00000620786 MASP2O00187 686 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms