RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 LPAL2Q16609 132 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TCTN1Q2MV58 587 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM91Q6ZNR0 172 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 FER1L6-AS2Q96M78 137 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 VN1R1Q9GZP7 353 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 GHITMQ9H3K2 345 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 MRM2Q9UI43 246 aaKnown RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 CDC14BO60729 498 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 CTSDP07339 412 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 NMBP08949 121 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 B4GALT1P15291 398 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 FA2HQ7L5A8 372 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10A7Q8NGE5 316 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 NEIL1Q96FI4 390 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF764Q96H86 408 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF835Q9Y2P0 537 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TTRP02766 147 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 YBX1P67809 324 aaKnown RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM3AP98173 230 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 FUT7Q11130 342 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM65Q6PI78 240 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 C6orf201Q7Z4U5 140 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 MRGPREQ86SM8 312 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF683Q8IZ20 524 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 CLDN23Q96B33 292 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 SNX22Q96L94 193 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 TSPAN32Q96QS1 320 aa9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 C6orf106Q9H6K1 298 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-209ENST00000617103 A0A096LPE4 126 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 IGHV3-64DA0A0J9YX35 117 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 HYAL3O43820 417 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 DHRS3O75911 302 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 PIAS2O75928 621 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 P2RY1P47900 373 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 AMTP48728 403 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 RRADP55042 308 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 PAX5Q02548 391 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 FMODQ06828 376 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF770Q6IQ21 691 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 C10orf111Q8N326 155 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 EID2BQ96D98 161 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 FAAP24Q9BTP7 215 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 MRPS18AQ9NVS2 196 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 DDX60LQ5H9U9 1706 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 RPS4Y2Q8TD47 263 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 KCNE4Q8WWG9 221 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 PARP11Q9NR21 331 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 SH3BGRL2Q9UJC5 107 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF391Q9UJN7 358 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 LSM2Q9Y333 95 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 MYO7AQ13402 2215 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 NPIPB8E9PQR5 432 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 OR1F12Q8NHA8 337 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 ALX4Q9H161 411 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 DECR2Q9NUI1 292 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM166BA8MTA8 275 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 HPP00738 406 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 ERVS71-1P61550 626 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 IFI44Q8TCB0 444 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 MEGF10Q96KG7 1140 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM9BQ9NQ34 198 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 PITPNC1Q9UKF7 332 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 LAMB1P07942 1786 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
CLTCL1-209ENST00000617103 OR2W5A6NFC9 320 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CRISP2P16562 243 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 DLK1P80370 383 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 Q6ZN92 141 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 OR4D11Q8NGI4 311 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 FGF14Q92915 247 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 ERRFI1Q9UJM3 462 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PDCD6O75340 191 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 GZMMP51124 257 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PPP2CBP62714 309 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PPP2CAP67775 309 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF117Q03924 483 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM109BQ6ICB4 259 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 C8orf44Q96CB5 159 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PRSS50Q9UI38 385 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 TNFSF18Q9UNG2 199 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PKD1L3Q7Z443 1732 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 IGHV3-15A0A0B4J1V0 119 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CRYM-AS1A6NIL9 109 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 PLRG1O43660 514 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms