RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 MAFIPQ8WZ33 124 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 MARS2Q96GW9 593 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 UNKLQ9H9P5 680 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 PNO1Q9NRX1 252 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 DOK5Q9P104 306 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 PTRH2Q9Y3E5 179 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 IGLV3-12A0A075B6K2 115 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 HLA-DQA2P01906 255 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 PAX1P15863 534 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 DDTP30046 118 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 NSDHLQ15738 373 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 SSX2Q16385 188 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 SLC35D2Q76EJ3 337 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 LHFPL1Q86WI0 220 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 PPP1R14AQ96A00 147 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 CMBLQ96DG6 245 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 MUCL1Q96DR8 90 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 CNTD2Q9H8S5 307 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 MSRB2Q9Y3D2 182 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 LRP12Q9Y561 859 aa19.29■□□□□ 0.68
POLR2J3-220ENST00000613744 LOC107986453A0A1B0GWG9 222 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 VSTM2BA6NLU5 285 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SYT7O43581 403 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 ZNF354AO60765 605 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 HEXBP07686 556 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SPARCP09486 303 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 RPS10P46783 165 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 NDUFA6P56556 154 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SKP2Q13309 424 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SURF2Q15527 256 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 FAM189A2Q15884 450 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 HIST2H3PS2Q5TEC6 136 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 IGF2-ASQ6U949 168 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 LANCL3Q6ZV70 420 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 ZNF615Q8N8J6 731 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 OR52N5Q8NH56 324 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 S100PBPQ96BU1 408 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 RTBDNQ9BSG5 229 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 C20orf24Q9BUV8 137 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 TGIF2Q9GZN2 237 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 MMACHCQ9Y4U1 282 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 BORCS7-ASMTA0A0B4J1R7 106 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 HRKO00198 91 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 KLF7O75840 302 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 EGR4Q05215 589 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SRSF6Q13247 344 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 RPUSD3Q6P087 351 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 NPSR1Q6W5P4 371 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 DCXRQ7Z4W1 244 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 VSX1Q9NZR4 365 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 TUBD1Q9UJT1 453 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 SLC5A6Q9Y289 635 aa19.28■□□□□ 0.68
POLR2J3-220ENST00000613744 TMEM14DPA8MWL7 114 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 ADAM10O14672 748 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 DEDDO75618 318 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 GNB3P16520 340 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 IGLV3-21P80748 117 aaPredicted RBP19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 BIKQ13323 160 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 VASH2Q86V25 355 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 DTX1Q86Y01 620 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 AKR7LQ8NHP1 331 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 GNRHR2Q96P88 292 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 GINS3Q9BRX5 216 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 ABHD6Q9BV23 337 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 C19orf12Q9NSK7 152 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 MRPL22Q9NWU5 206 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 IL17BQ9UHF5 180 aa19.27■□□□□ 0.68
POLR2J3-220ENST00000613744 PRSS37A4D1T9 235 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CXorf65A6NEN9 183 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 VSIG8P0DPA2 414 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CEACAM6P40199 344 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 EMP2P54851 167 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 TMEM33P57088 247 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 SLC35A1P78382 337 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CD300LFQ8TDQ1 290 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 EMG1Q92979 244 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 SSX3Q99909 188 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 C1orf123Q9NWV4 160 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 OR52A1Q9UKL2 312 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 AMDHD2Q9Y303 409 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 LAMA5O15230 3695 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 IGLV1-36A0A0B4J1U3 117 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 IGHV3-20A0A0C4DH32 117 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 ZNF587BE7ETH6 402 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 GMFGO60234 142 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 UMODP07911 640 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 RPS2P15880 293 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CD82P27701 267 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CAMLGP49069 296 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 NPY4RP50391 375 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 ZNF117Q03924 483 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 FNDC7Q5VTL7 733 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 OR4C3Q8NH37 302 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 C5orf34Q96MH7 638 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 G6PC2Q9NQR9 355 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 TCFL5Q9UL49 500 aa19.26■□□□□ 0.67
POLR2J3-220ENST00000613744 CEP295Q9C0D2 2601 aa19.25■□□□□ 0.67
POLR2J3-220ENST00000613744 CFAP47Q6ZTR5 3102 aa19.25■□□□□ 0.67
POLR2J3-220ENST00000613744 IGKV3D-11A0A0A0MRZ8 115 aa19.25■□□□□ 0.67
POLR2J3-220ENST00000613744 C17orf105B2RV13 164 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms