RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ADAT3Q96EY9 351 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 ADTRPQ96IZ2 230 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 TEX37Q96LM6 180 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 IFITM10A6NMD0 228 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 PRR35P0CG20 571 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 TMEM136Q6ZRR5 245 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 DERL3Q96Q80 235 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 OCIAD1Q9NX40 245 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 SLC25A37Q9NYZ2 338 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CACNA1EQ15878 2313 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 ZNF253O75346 499 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CXorf1O96002 111 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 ANKRD34CP0C6C1 535 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 HTR5AP47898 357 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 VASPP50552 380 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 NTMQ9P121 344 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 SLC17A4Q9Y2C5 497 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 SH2D1BO14796 132 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 C1orf140Q5VVS0 124 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 GLCCI1Q86VQ1 547 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 S1PR3Q99500 378 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 KCPQ6ZWJ8 1503 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 ARID2Q68CP9 1835 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 DOCK1Q14185 1865 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 LMX1BO60663 402 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 AESQ08117 197 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 SLC39A5Q6ZMH5 540 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 C19orf47Q8N9M1 422 aaKnown RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 C5AR2Q9P296 337 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 KCNE5Q9UJ90 142 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 HNRNPA1P09651 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
TTC28-208ENST00000612946 LRRC18Q8N456 261 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 FBLIM1Q8WUP2 373 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 IGSF21Q96ID5 467 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 GPX7Q96SL4 187 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 UBE2ZQ9H832 354 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 ARG1P05089 322 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 FOLR2P14207 255 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 AMMECR1LQ6DCA0 310 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 PDLIM7Q9NR12 457 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 CLDND1Q9NY35 253 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 TIMP2P16035 220 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 PXNP49023 591 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 VN1R17PQ8TDU5 208 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 PIGCQ92535 297 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 SCAMP4Q969E2 229 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 MS4A6EQ96DS6 147 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 SOX21Q9Y651 276 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 SFTPCP11686 197 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 TCTN3Q6NUS6 607 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 CLEC18BQ6UXF7 455 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 BOD1Q96IK1 185 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 CDX2Q99626 313 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 NXPH2O95156 264 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 SOD2P04179 222 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 SLC25A35Q3KQZ1 300 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 LRP10Q7Z4F1 713 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 OR11H7Q8NGC8 314 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 DOT1LQ8TEK3 1739 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 C19orf53Q9UNZ5 99 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 HEPACAM2A8MVW5 462 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 IGHA1P01876 353 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 ARF6P62330 175 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 TMEM179BQ7Z7N9 219 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 TMEM151BQ8IW70 566 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 WDFY1Q8IWB7 410 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 OR5AS1Q8N127 324 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 MOB3AQ96BX8 217 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 KLHDC7BQ96G42 594 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 KCND3Q9UK17 655 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 UBE2CO00762 179 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 CA3P07451 260 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 NUFIP2Q7Z417 695 aaKnown RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 HMGN2P46Q86SG4 172 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 ZG16BQ96DA0 208 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 GHITMQ9H3K2 345 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 TAAR2Q9P1P5 351 aa7.9□□□□□ -1.14
TTC28-208ENST00000612946 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.9□□□□□ -1.14
TTC28-208ENST00000612946 STATHP02808 62 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 RELQ04864 619 aaPredicted RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 RGS7BPQ6MZT1 257 aaPredicted RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 ARIH2OSQ8N7S6 290 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 OR1L6Q8NGR2 347 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 PTPMT1Q8WUK0 201 aaPredicted RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 MRPL13Q9BYD1 178 aaKnown RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 MRPS16Q9Y3D3 137 aaKnown RBP7.9□□□□□ -1.15
TTC28-208ENST00000612946 METAP1P53582 386 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 PKDCCQ504Y2 493 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 POM121L2Q96KW2 1035 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 OR2V2Q96R30 315 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 IKZF5Q9H5V7 419 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 RER1O15258 196 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 GLIPR1P48060 266 aa7.9□□□□□ -1.15
TTC28-208ENST00000612946 ERV3-1Q14264 604 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms