RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SPSB1Q96BD6 273 aa15.03■□□□□ -0
NEK3-206ENST00000611833 CNTRLQ7Z7A1 2325 aa15.02■□□□□ -0
NEK3-206ENST00000611833 NCKAP5O14513 1909 aa15.02■□□□□ -0
NEK3-206ENST00000611833 DHRS7CA6NNS2 312 aa15.02■□□□□ -0
NEK3-206ENST00000611833 TRIM77I1YAP6 450 aa15.02■□□□□ -0
NEK3-206ENST00000611833 DNPH1O43598 174 aa15.02■□□□□ -0
NEK3-206ENST00000611833 SYNGR3O43761 229 aa15.02■□□□□ -0
NEK3-206ENST00000611833 LYL1P12980 280 aa15.02■□□□□ -0
NEK3-206ENST00000611833 CRYGSP22914 178 aa15.02■□□□□ -0
NEK3-206ENST00000611833 SRD5A2P31213 254 aa15.02■□□□□ -0
NEK3-206ENST00000611833 ECI1P42126 302 aa15.02■□□□□ -0
NEK3-206ENST00000611833 Q0VFX4 171 aa15.02■□□□□ -0
NEK3-206ENST00000611833 PLXDC2Q6UX71 529 aa15.02■□□□□ -0
NEK3-206ENST00000611833 POC1AQ8NBT0 407 aa15.02■□□□□ -0
NEK3-206ENST00000611833 CPNE2Q96FN4 548 aaPredicted RBP15.02■□□□□ -0
NEK3-206ENST00000611833 SLC6A15Q9H2J7 730 aa15.02■□□□□ -0
NEK3-206ENST00000611833 C1orf123Q9NWV4 160 aa15.02■□□□□ -0
NEK3-206ENST00000611833 CST2P09228 141 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 PRSS12P56730 875 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 SCRN3Q0VDG4 424 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 CNN3Q15417 329 aaKnown RBP15.01□□□□□ -0.01
NEK3-206ENST00000611833 TAF9Q16594 264 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 RPUSD3Q6P087 351 aaKnown RBP15.01□□□□□ -0.01
NEK3-206ENST00000611833 AAED1Q7RTV5 226 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 FOXRED2Q8IWF2 684 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 SULF2Q8IWU5 870 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 OR51F2Q8NH61 342 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 KCNE4Q8WWG9 221 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 AQP10Q96PS8 301 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 FAAP24Q9BTP7 215 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 OR2S2Q9NQN1 319 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 TMEM38BQ9NVV0 291 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
NEK3-206ENST00000611833 B4GALT1P15291 398 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 OTX2P32243 289 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 PTGER4P35408 488 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 AKR1C2P52895 323 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 AKR1C1Q04828 323 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 PPP1R32Q7Z5V6 425 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 SGPP2Q8IWX5 399 aa15.01□□□□□ -0.01
NEK3-206ENST00000611833 ALKBH3Q96Q83 286 aaPredicted RBP15.01□□□□□ -0.01
NEK3-206ENST00000611833 TRAPPC6AO75865 159 aa15□□□□□ -0.01
NEK3-206ENST00000611833 PATE4P0C8F1 98 aa15□□□□□ -0.01
NEK3-206ENST00000611833 ZNF32P17041 273 aa15□□□□□ -0.01
NEK3-206ENST00000611833 GGNQ86UU5 652 aa15□□□□□ -0.01
NEK3-206ENST00000611833 AKR7LQ8NHP1 331 aa15□□□□□ -0.01
NEK3-206ENST00000611833 ARL11Q969Q4 196 aa15□□□□□ -0.01
NEK3-206ENST00000611833 BORCS8Q96FH0 119 aa15□□□□□ -0.01
NEK3-206ENST00000611833 NKX6-2Q9C056 277 aaPredicted RBP15□□□□□ -0.01
NEK3-206ENST00000611833 TMEM100Q9NV29 134 aa15□□□□□ -0.01
NEK3-206ENST00000611833 ANXA10Q9UJ72 324 aa15□□□□□ -0.01
NEK3-206ENST00000611833 EDARQ9UNE0 448 aa15□□□□□ -0.01
NEK3-206ENST00000611833 RRP8O43159 456 aaKnown RBP15□□□□□ -0.01
NEK3-206ENST00000611833 CXCL13O43927 109 aa15□□□□□ -0.01
NEK3-206ENST00000611833 RFPL3SP0C7P2 107 aa15□□□□□ -0.01
NEK3-206ENST00000611833 HTR5AP47898 357 aa15□□□□□ -0.01
NEK3-206ENST00000611833 HGFACQ04756 655 aa15□□□□□ -0.01
NEK3-206ENST00000611833 CPT1CQ8TCG5 803 aa15□□□□□ -0.01
NEK3-206ENST00000611833 SMOC1Q9H4F8 434 aa15□□□□□ -0.01
NEK3-206ENST00000611833 DNAJB11Q9UBS4 358 aa15□□□□□ -0.01
NEK3-206ENST00000611833 TMEM218A2RU14 115 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 DNASE2O00115 360 aaPredicted RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 CD79AP11912 226 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 RBP2P50120 134 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 RRADP55042 308 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 IAH1Q2TAA2 248 aaPredicted RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 CCDC157Q569K6 752 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 TMEM200AQ86VY9 491 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 NAXEQ8NCW5 288 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 GUCD1Q96NT3 240 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 TSNAXQ99598 290 aaKnown RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 CMSS1Q9BQ75 279 aaKnown RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 AK3Q9UIJ7 227 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 TCFL5Q9UL49 500 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 IGKV1-27A0A075B6S5 117 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 ZNF716A6NP11 495 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 ZNF850A8MQ14 1090 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 ZNF705EA8MWA4 302 aaPredicted RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 TOR1AO14656 332 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 ATG12O94817 140 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 IGHEP01854 428 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 CTSDP07339 412 aaPredicted RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 OR5H8P0DN80 308 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 RGS19P49795 217 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 IL15RAQ13261 267 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 RBM39Q14498 530 aaKnown RBP14.99□□□□□ -0.01
NEK3-206ENST00000611833 SLC23A3Q6PIS1 610 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 PADI1Q9ULC6 663 aa14.99□□□□□ -0.01
NEK3-206ENST00000611833 PMS2P1A4D2B8 440 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 LRRC3CA6NJW4 275 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 NRASP01111 189 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 ICAM2P13598 275 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 OPRM1P35372 400 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 WIPI1Q5MNZ9 446 aaPredicted RBP14.98□□□□□ -0.01
NEK3-206ENST00000611833 LHFPL2Q6ZUX7 228 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 OR10D3Q8NH80 312 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 FNDC9Q8TBE3 224 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 SLC5A7Q9GZV3 580 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 HSF4Q9ULV5 492 aa14.98□□□□□ -0.01
NEK3-206ENST00000611833 TIMM10BQ9Y5J6 103 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms