RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 HLA-CQ95604 372 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 KCNK7Q9Y2U2 307 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 PRELID3BQ9Y3B1 194 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 ANKRD36A6QL64 1941 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 SFT2D2O95562 160 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 FABP9Q0Z7S8 132 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
MUC1-223ENST00000611571 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 APH1AQ96BI3 265 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 WDR13Q9H1Z4 485 aa12.29□□□□□ -0.44
MUC1-223ENST00000611571 HSPB2A8KAH6 182 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 HBE1P02100 147 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 ZNF32P17041 273 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
MUC1-223ENST00000611571 MSMO1Q15800 293 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 HSPB2Q16082 182 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 HSD17B13Q7Z5P4 300 aaPredicted RBP12.28□□□□□ -0.44
MUC1-223ENST00000611571 CXorf67Q86X51 503 aaPredicted RBP12.28□□□□□ -0.44
MUC1-223ENST00000611571 ZDHHC22Q8N966 263 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 IFI44Q8TCB0 444 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 HGDQ93099 445 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 UQCC1Q9NVA1 299 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 MBTPS2O43462 519 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 UPK3AO75631 287 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 HMGN3Q15651 99 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 STPG2Q8N412 459 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 ARHGEF39Q8N4T4 335 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 OR6S1Q8NH40 331 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 TMEM68Q96MH6 324 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 KLK13Q9UKR3 277 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 PLSCR5A0PG75 271 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 SERPINE3A8MV23 424 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 TAS2R30P59541 319 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 PPIAP62937 165 aaKnown RBP12.28□□□□□ -0.44
MUC1-223ENST00000611571 SSBP1Q04837 148 aaKnown RBP12.28□□□□□ -0.44
MUC1-223ENST00000611571 SLC22A18ASQ8N1D0 253 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 SMOC1Q9H4F8 434 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 RPH3ALQ9UNE2 315 aa12.28□□□□□ -0.44
MUC1-223ENST00000611571 hCG_1809904A0A1W2PP81 198 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 A0A1W2PR64 198 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 A0A1W2PRV1 198 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 ZNF732B4DXR9 585 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 POLR2GP62487 172 aaKnown RBP eCLIP12.27□□□□□ -0.44
MUC1-223ENST00000611571 CLN3Q13286 438 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 PHF7Q9BWX1 381 aaPredicted RBP12.27□□□□□ -0.44
MUC1-223ENST00000611571 PLEKHA2Q9HB19 425 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 PLA2G3Q9NZ20 509 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 KIAA2026Q5HYC2 2103 aa12.27□□□□□ -0.44
MUC1-223ENST00000611571 TIMM8AO60220 97 aaPredicted RBP12.27□□□□□ -0.45
MUC1-223ENST00000611571 C1QL1O75973 258 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 KRASP01116 189 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 IGHV3-7P01780 117 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 SRPXP78539 464 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 HTD2P86397 168 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 TTC9Q92623 222 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 EXTL1Q92935 676 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 RAB33BQ9H082 229 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 POU2F2P09086 479 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 SRFP11831 508 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 ICAM2P13598 275 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 RFESDQ8TAC1 157 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 MRPL24Q96A35 216 aaKnown RBP12.27□□□□□ -0.45
MUC1-223ENST00000611571 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
MUC1-223ENST00000611571 DOCK4Q8N1I0 1966 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 FPR2P25090 351 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 FABP6P51161 128 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 ZP1P60852 638 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 MPPED2Q15777 294 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 RABEPKQ7Z6M1 372 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 TM4SF19Q96DZ7 209 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 HDGFL3Q9Y3E1 203 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 PHF3Q92576 2039 aaKnown RBP12.26□□□□□ -0.45
MUC1-223ENST00000611571 ZNF236Q9UL36 1845 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 IGHV1OR15-9A0A0B4J2B8 117 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 KIR2DS1A0A191URI9 304 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 PHOX2AO14813 284 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 SHOXO15266 292 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 CST4P01036 141 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 KIR2DS4P43632 304 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 KIR2DS1Q14954 304 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 FOXB1Q99853 325 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 UQCC2Q9BRT2 126 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 ZNF646O15015 1829 aaPredicted RBP12.26□□□□□ -0.45
MUC1-223ENST00000611571 B3GALNT1O75752 331 aa12.26□□□□□ -0.45
MUC1-223ENST00000611571 GALNSP34059 522 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms