RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RNFT1Q5M7Z0 435 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 NKAPLQ5M9Q1 402 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 PXT1Q8NFP0 134 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 OR5AP2Q8NGF4 316 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 SCGB3A2Q96PL1 93 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 HSF4Q9ULV5 492 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 NPY4RP50391 375 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 FGL1Q08830 312 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 SIGIRRQ6IA17 410 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 VASH2Q86V25 355 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 TMEM185AQ8NFB2 350 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 OR13G1Q8NGZ3 307 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 MAFIPQ8WZ33 124 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 EMG1Q92979 244 aaKnown RBP24.28■■□□□ 1.48
CSPG5-205ENST00000610462 IL36GQ9NZH8 169 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 SPRR3Q9UBC9 169 aa24.28■■□□□ 1.48
CSPG5-205ENST00000610462 ZNF503-AS2A6NEH8 195 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 FPR2P25090 351 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 ARR3P36575 388 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 CAMK2BQ13554 666 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 HLXQ14774 488 aaPredicted RBP24.27■■□□□ 1.48
CSPG5-205ENST00000610462 ZDHHC11Q9H8X9 412 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 ASCL3Q9NQ33 180 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 OSGIN2Q9Y236 505 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 AUP1Q9Y679 476 aa24.27■■□□□ 1.48
CSPG5-205ENST00000610462 IGKV1-12A0A0C4DH73 117 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 IGKV1D-12P01611 117 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CD79AP11912 226 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CCNOP22674 350 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 NUBP1P53384 320 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 PDZK1IP1Q13113 114 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 TAF9Q16594 264 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 TMEM128Q5BJH2 165 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 C3P1Q6ZMU1 363 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 TMPRSS7Q7RTY8 843 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 PEG10Q86TG7 708 aaKnown RBP24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CASTOR1Q8WTX7 329 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 PPA2Q9H2U2 334 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 C5orf66Q9H5L9 145 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 EHFQ9NZC4 300 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 C5orf49A4QMS7 147 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CCSO14618 274 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 LRP3O75074 770 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 RPA2P15927 270 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 TNFSF10P50591 281 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CHRFAM7AQ494W8 412 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 CLLU1Q5K131 121 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 RPUSD3Q6P087 351 aaKnown RBP24.26■■□□□ 1.47
CSPG5-205ENST00000610462 PDCD10Q9BUL8 212 aa24.26■■□□□ 1.47
CSPG5-205ENST00000610462 REPIN1Q9BWE0 567 aaKnown RBP24.26■■□□□ 1.47
CSPG5-205ENST00000610462 ZNF701Q9NV72 531 aaPredicted RBP24.26■■□□□ 1.47
CSPG5-205ENST00000610462 OR5H14A6NHG9 310 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 NKX2-8O15522 239 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 OVCH2Q7RTZ1 564 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 MRPS24Q96EL2 167 aaKnown RBP24.25■■□□□ 1.47
CSPG5-205ENST00000610462 PRSS50Q9UI38 385 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 CACNA1HO95180 2353 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 RPS10-NUDT3A0A1W2PQS6 291 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 SDCBPO00560 298 aaPredicted RBP24.25■■□□□ 1.47
CSPG5-205ENST00000610462 RAB1AP62820 205 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 AADACL3Q5VUY0 350 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 OSR2Q8N2R0 312 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 TMEM230Q96A57 120 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 ARL6Q9H0F7 186 aa24.25■■□□□ 1.47
CSPG5-205ENST00000610462 CCL2P13500 99 aa24.24■■□□□ 1.47
CSPG5-205ENST00000610462 AGTR1P30556 359 aa24.24■■□□□ 1.47
CSPG5-205ENST00000610462 APOBEC3DQ96AK3 386 aaPredicted RBP24.24■■□□□ 1.47
CSPG5-205ENST00000610462 FAAP24Q9BTP7 215 aa24.24■■□□□ 1.47
CSPG5-205ENST00000610462 ZNF318Q5VUA4 2279 aa24.24■■□□□ 1.47
CSPG5-205ENST00000610462 ZNF850A8MQ14 1090 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 RP2O75695 350 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 CHATP28329 748 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 HDHD3Q9BSH5 251 aaPredicted RBP24.23■■□□□ 1.47
CSPG5-205ENST00000610462 MFFQ9GZY8 342 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 PCDHB16Q9NRJ7 776 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 COMMD9Q9P000 198 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 SLC22A20A6NK97 555 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 DBX1A6NMT0 343 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 SRSF6Q13247 344 aaKnown RBP24.23■■□□□ 1.47
CSPG5-205ENST00000610462 TMEM65Q6PI78 240 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 KCTD9Q7L273 389 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 ZSCAN4Q8NAM6 433 aaPredicted RBP24.23■■□□□ 1.47
CSPG5-205ENST00000610462 OR56B2PQ8NGI1 322 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 SEC22AQ96IW7 307 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 RTBDNQ9BSG5 229 aaPredicted RBP24.23■■□□□ 1.47
CSPG5-205ENST00000610462 C12orf49Q9H741 205 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 AK3Q9UIJ7 227 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 EDARQ9UNE0 448 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 CSAG2Q9Y5P2 127 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 OTOGLQ3ZCN5 2332 aa24.23■■□□□ 1.47
CSPG5-205ENST00000610462 IGKV1D-8A0A087WSZ0 117 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 RRP8O43159 456 aaKnown RBP24.22■■□□□ 1.47
CSPG5-205ENST00000610462 MALLQ13021 153 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 NSUN5P2Q63ZY6 315 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 POM121L2Q96KW2 1035 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 GP6Q9HCN6 339 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 GPR160Q9UJ42 338 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 TTC28Q96AY4 2481 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 SLC25A4P12235 298 aa24.22■■□□□ 1.47
CSPG5-205ENST00000610462 RAB14P61106 215 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms