RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 LYRM2Q9NU23 88 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-205ENST00000609104 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
USP6NL-205ENST00000609104 KLK8O60259 260 aa11.72□□□□□ -0.53
USP6NL-205ENST00000609104 IGFBP6P24592 240 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-205ENST00000609104 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
USP6NL-205ENST00000609104 SLC25A22Q9H936 323 aa11.72□□□□□ -0.53
USP6NL-205ENST00000609104 A0A0A6YYD5 115 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 SHISA7A6NL88 538 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 CCL7P80098 99 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 TMEM56Q96MV1 263 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 HTR1DP28221 377 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 IER2Q9BTL4 223 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 NDUFB3O43676 98 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 CST2P09228 141 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 RPL29P47914 159 aaKnown RBP11.71□□□□□ -0.53
USP6NL-205ENST00000609104 IGFBP7Q16270 282 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 ANGPTL6Q8NI99 470 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 FAM117AQ9C073 453 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 AP5S1Q9NUS5 200 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 FIGNL2A6NMB9 653 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 CD96P40200 585 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 RHOBP62745 196 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 LYG1Q8N1E2 194 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 PP6455Q8WZ26 134 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 MYEOVQ96EZ4 313 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.53
USP6NL-205ENST00000609104 FUT3P21217 361 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 FAM53BQ14153 422 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 OR2V1Q8NHB1 315 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 CAMPP49913 170 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 MUC20Q8N307 709 aaPredicted RBP11.71□□□□□ -0.54
USP6NL-205ENST00000609104 OR4F17Q8NGA8 305 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 SLIRPQ9GZT3 109 aaKnown RBP11.71□□□□□ -0.54
USP6NL-205ENST00000609104 NPTNQ9Y639 398 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 CST4P01036 141 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 PGA3P0DJD8 388 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 DYNLT3P51808 116 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 ZNF260Q3ZCT1 412 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 RNF24Q9Y225 148 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 GNG3P63215 75 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 NHLRC1Q6VVB1 395 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 PRRX2Q99811 253 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.54
USP6NL-205ENST00000609104 HYAL3O43820 417 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-205ENST00000609104 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 OR3A4PP47883 348 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 TMED3Q9Y3Q3 217 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 DHHO43323 396 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 CRYBB2P43320 205 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 MEOX1P50221 254 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 SPCS3P61009 180 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■□□□ 12.8
USP6NL-205ENST00000609104 FAM219BQ5XKK7 198 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 FDX2Q6P4F2 183 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 UBE2ZQ9H832 354 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-205ENST00000609104 CNRIP1Q96F85 164 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-205ENST00000609104 IP6K3Q96PC2 410 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 PPP1R1AQ13522 171 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-205ENST00000609104 OCIAD1Q9NX40 245 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 RNF224P0DH78 156 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 MMP17Q9ULZ9 603 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 NDUFB6O95139 128 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 DHRS2Q13268 280 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 ESPL1Q14674 2120 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 FBXL14Q8N1E6 418 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 IGHV3-13P01766 116 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 IGHV3-7P01780 117 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 BMI1P35226 326 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 PPP2CBP62714 309 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 PPP2CAP67775 309 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 ZPBPQ9BS86 351 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 LOXL2Q9Y4K0 774 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 TOGARAM1Q9Y4F4 1720 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 CYR61O00622 381 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 HRASP01112 189 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 NGFP01138 241 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 PTGFRP43088 359 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 CRYBA1P05813 215 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 CA6P23280 308 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 Q6ZN92 141 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
USP6NL-205ENST00000609104 M0R2Z0 102 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 ANKRD34CP0C6C1 535 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 FAM78BQ5VT40 261 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 ZMIZ1Q9ULJ6 1067 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 ALG1L2C9J202 215 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 VMA21Q3ZAQ7 101 aa11.69□□□□□ -0.54
USP6NL-205ENST00000609104 FNDC7Q5VTL7 733 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms